Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL592295.1-201ENST00000400984 884 ntBASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 AC022211.4-201ENST00000625094 2161 ntBASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 AC103834.1-201ENST00000520383 144 ntBASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD3Q7Z3D4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.59■■□□□ 1.37
LYSMD3Q7Z3D4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 RARRES2P1-201ENST00000474487 481 ntBASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYSMD3Q7Z3D4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
LYSMD3Q7Z3D4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD3Q7Z3D4 MIR4508-201ENST00000584178 70 ntBASIC23.57■■□□□ 1.36
LYSMD3Q7Z3D4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD3Q7Z3D4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD3Q7Z3D4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.56■■□□□ 1.36
LYSMD3Q7Z3D4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD3Q7Z3D4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD3Q7Z3D4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 AC022616.5-201ENST00000518796 181 ntBASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD3Q7Z3D4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD3Q7Z3D4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 YBX1P4-201ENST00000392794 808 ntBASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD3Q7Z3D4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
LYSMD3Q7Z3D4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.52■■□□□ 1.36
LYSMD3Q7Z3D4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LYSMD3Q7Z3D4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 AC142381.3-201ENST00000568208 1670 ntBASIC23.51■■□□□ 1.35
LYSMD3Q7Z3D4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 AC138932.3-201ENST00000567634 1902 ntBASIC23.5■■□□□ 1.35
LYSMD3Q7Z3D4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms