Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00336Q6ZUF6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC00336Q6ZUF6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 AL031432.3-201ENST00000607698 485 ntBASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00336Q6ZUF6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00336Q6ZUF6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.71■□□□□ 0.1
LINC00336Q6ZUF6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 AC105265.2-201ENST00000467189 838 ntBASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 DUX4L19-201ENST00000557448 1267 ntBASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 MIR6722-201ENST00000617286 78 ntBASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 MIR6821-201ENST00000617625 74 ntBASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00336Q6ZUF6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00336Q6ZUF6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 AC004448.1-201ENST00000458332 883 ntBASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00336Q6ZUF6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 AC024257.2-201ENST00000549699 147 ntBASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00336Q6ZUF6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 AC097381.1-201ENST00000429019 1296 ntBASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00336Q6ZUF6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 AL449106.1-201ENST00000608517 1980 ntBASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00336Q6ZUF6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00336Q6ZUF6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00336Q6ZUF6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms