Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.084e-7■■■■■ 32
DDX59Q5T1V6 CORO7-PAM16-201ENST00000572274 672 ntTSL 514.47□□□□□ -0.094e-7■■■■■ 32
DDX59Q5T1V6 PAM16-209ENST00000573614 650 ntTSL 514.06□□□□□ -0.164e-7■■■■■ 32
DDX59Q5T1V6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.264e-7■■■■■ 32
DDX59Q5T1V6 PAM16-202ENST00000571178 353 ntTSL 313.06□□□□□ -0.324e-7■■■■■ 32
DDX59Q5T1V6 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.414e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-209ENST00000507139 472 ntTSL 419.31■□□□□ 0.683e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-206ENST00000504844 777 ntTSL 218.86■□□□□ 0.613e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-203ENST00000502336 581 ntTSL 417.52■□□□□ 0.43e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.333e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-214ENST00000512816 558 ntTSL 315.13■□□□□ 0.013e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-202ENST00000502295 503 ntTSL 414.63□□□□□ -0.073e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-216ENST00000520967 878 ntTSL 314.32□□□□□ -0.123e-7■■■■■ 32
DDX59Q5T1V6 CXXC5-207ENST00000504944 568 ntTSL 313.09□□□□□ -0.313e-7■■■■■ 32
DDX59Q5T1V6 DOT1L-204ENST00000457590 2907 ntTSL 515.51■□□□□ 0.071e-7■■■■■ 32
DDX59Q5T1V6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.13□□□□□ -0.152e-6■■■■■ 32
DDX59Q5T1V6 INF2-201ENST00000252527 3050 ntTSL 213.65□□□□□ -0.222e-6■■■■■ 32
DDX59Q5T1V6 NPAS2-205ENST00000450763 607 ntTSL 413.81□□□□□ -0.29e-11■■■■■ 31.9
DDX59Q5T1V6 NPAS2-203ENST00000433408 1047 ntTSL 511.17□□□□□ -0.629e-11■■■■■ 31.9
DDX59Q5T1V6 NPAS2-208ENST00000474550 7983 ntTSL 1 (best)10.07□□□□□ -0.89e-11■■■■■ 31.9
DDX59Q5T1V6 NPAS2-212ENST00000495559 3834 ntTSL 28.13□□□□□ -1.119e-11■■■■■ 31.9
DDX59Q5T1V6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.394e-7■■■■■ 31.9
DDX59Q5T1V6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.074e-7■■■■■ 31.9
DDX59Q5T1V6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.714e-7■■■■■ 31.9
DDX59Q5T1V6 C2-217ENST00000497706 1609 ntTSL 513.71□□□□□ -0.224e-6■■■■■ 31.9
DDX59Q5T1V6 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.77□□□□□ -0.534e-6■■■■■ 31.9
DDX59Q5T1V6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.34■■□□□ 1.973e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.93e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.46■■□□□ 1.513e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-205ENST00000417512 626 ntTSL 211.85□□□□□ -0.513e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-210ENST00000481114 340 ntTSL 211.78□□□□□ -0.523e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-207ENST00000461693 869 ntTSL 210.85□□□□□ -0.673e-7■■■■■ 31.8
DDX59Q5T1V6 SDCCAG3-208ENST00000466579 496 ntTSL 1 (best)8.6□□□□□ -1.033e-7■■■■■ 31.8
DDX59Q5T1V6 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.52□□□□□ -1.379e-7■■■■■ 31.8
DDX59Q5T1V6 RTEL1-TNFRSF6B-204ENST00000496281 5314 ntTSL 217.68■□□□□ 0.421e-6■■■■■ 31.8
DDX59Q5T1V6 PQLC1-212ENST00000590895 865 ntTSL 314.92□□□□□ -0.025e-7■■■■■ 31.8
DDX59Q5T1V6 LINC00893-204ENST00000431214 789 ntTSL 513.46□□□□□ -0.251e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.09□□□□□ -0.471e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-206ENST00000447209 564 ntTSL 310.92□□□□□ -0.661e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-210ENST00000608355 495 ntTSL 510.44□□□□□ -0.741e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-212ENST00000609161 524 ntTSL 4 BASIC10.34□□□□□ -0.751e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-213ENST00000609314 894 ntTSL 510.33□□□□□ -0.761e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-214ENST00000609651 601 ntTSL 49.5□□□□□ -0.891e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-211ENST00000608616 747 ntTSL 29.5□□□□□ -0.891e-8■■■■■ 31.7
DDX59Q5T1V6 LINC00893-209ENST00000608342 556 ntTSL 48.87□□□□□ -0.991e-8■■■■■ 31.7
DDX59Q5T1V6 POLR1E-203ENST00000442009 1805 ntTSL 217.79■□□□□ 0.444e-12■■■■■ 31.7
DDX59Q5T1V6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.174e-12■■■■■ 31.7
DDX59Q5T1V6 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC10.56□□□□□ -0.724e-12■■■■■ 31.7
DDX59Q5T1V6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.35e-7■■■■■ 31.6
DDX59Q5T1V6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.125e-7■■■■■ 31.6
DDX59Q5T1V6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.075e-7■■■■■ 31.6
DDX59Q5T1V6 DUS3L-212ENST00000592468 797 ntTSL 514.58□□□□□ -0.085e-7■■■■■ 31.6
DDX59Q5T1V6 DUS3L-204ENST00000589085 2301 ntTSL 514.34□□□□□ -0.115e-7■■■■■ 31.6
DDX59Q5T1V6 DUS3L-211ENST00000591560 768 ntTSL 513.97□□□□□ -0.175e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-217ENST00000509119 509 ntTSL 317.24■□□□□ 0.359e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-208ENST00000504223 698 ntTSL 316.25■□□□□ 0.199e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-210ENST00000506360 5829 ntTSL 216.1■□□□□ 0.179e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-203ENST00000457650 617 ntTSL 515.4■□□□□ 0.069e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-219ENST00000510763 543 ntTSL 414.9□□□□□ -0.029e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-207ENST00000503284 560 ntTSL 414.57□□□□□ -0.089e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-206ENST00000502669 3484 ntTSL 1 (best)14.53□□□□□ -0.089e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-225ENST00000515682 4293 ntTSL 213.34□□□□□ -0.279e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.319e-7■■■■■ 31.6
DDX59Q5T1V6 SH3TC1-221ENST00000512100 755 ntTSL 313.02□□□□□ -0.339e-7■■■■■ 31.6
DDX59Q5T1V6 DPP9-215ENST00000599163 835 ntTSL 511.68□□□□□ -0.541e-6■■■■■ 31.6
DDX59Q5T1V6 DPP9-207ENST00000597145 4257 ntTSL 211.6□□□□□ -0.551e-6■■■■■ 31.6
DDX59Q5T1V6 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC10.21□□□□□ -0.771e-6■■■■■ 31.6
DDX59Q5T1V6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.041e-6■■■■■ 31.5
DDX59Q5T1V6 MAMSTR-205ENST00000599703 714 ntTSL 59.55□□□□□ -0.881e-6■■■■■ 31.5
DDX59Q5T1V6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.152e-7■■■■■ 31.5
DDX59Q5T1V6 PROSER3-216ENST00000620918 3606 ntTSL 511.96□□□□□ -0.492e-7■■■■■ 31.5
DDX59Q5T1V6 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC9.97□□□□□ -0.815e-7■■■■■ 31.5
DDX59Q5T1V6 PTK2-218ENST00000519993 4388 ntTSL 1 (best)17.14■□□□□ 0.335e-7■■■■■ 31.4
DDX59Q5T1V6 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.33□□□□□ -0.275e-7■■■■■ 31.4
DDX59Q5T1V6 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.225e-7■■■■■ 31.4
DDX59Q5T1V6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.315e-7■■■■■ 31.4
DDX59Q5T1V6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.25□□□□□ -1.415e-7■■■■■ 31.4
DDX59Q5T1V6 SHANK2-212ENST00000458632 635 ntTSL 311.38□□□□□ -0.597e-7■■■■■ 31.3
DDX59Q5T1V6 SHANK2-221ENST00000618363 434 ntTSL 310.49□□□□□ -0.737e-7■■■■■ 31.3
DDX59Q5T1V6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-8■■■■■ 31.3
DDX59Q5T1V6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.71e-6■■■■■ 31.2
DDX59Q5T1V6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.091e-6■■■■■ 31.2
DDX59Q5T1V6 SORCS2-204ENST00000511199 532 ntTSL 48.44□□□□□ -1.061e-6■■■■■ 31.2
DDX59Q5T1V6 BAIAP2L1-204ENST00000479789 521 ntTSL 38.8□□□□□ -17e-8■■■■■ 31.2
DDX59Q5T1V6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.495e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-202ENST00000525807 1122 ntTSL 517.06■□□□□ 0.325e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-213ENST00000533777 2101 ntTSL 1 (best)16.85■□□□□ 0.295e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-203ENST00000527138 798 ntTSL 415.15■□□□□ 0.025e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC11.51□□□□□ -0.575e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-209ENST00000529612 574 ntTSL 411□□□□□ -0.655e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-215ENST00000534237 691 ntTSL 310.16□□□□□ -0.785e-7■■■■■ 31.2
DDX59Q5T1V6 CTSH-217ENST00000534533 836 ntTSL 39.21□□□□□ -0.945e-7■■■■■ 31.2
DDX59Q5T1V6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 06e-7■■■■■ 31.2
DDX59Q5T1V6 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.466e-7■■■■■ 31.2
DDX59Q5T1V6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.083e-6■■■■■ 31.1
DDX59Q5T1V6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.9□□□□□ -0.023e-6■■■■■ 31.1
DDX59Q5T1V6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.113e-6■■■■■ 31.1
DDX59Q5T1V6 PRKD2-203ENST00000593363 669 ntTSL 213.03□□□□□ -0.323e-6■■■■■ 31.1
DDX59Q5T1V6 PRKD2-211ENST00000598633 541 ntTSL 510.7□□□□□ -0.73e-6■■■■■ 31.1
Retrieved 100 of 7,289 protein–RNA pairs in 309.5 ms