Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.86■■■□□ 2.69
ZC3H6P61129 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ZC3H6P61129 AL136162.1-201ENST00000607711 1078 ntBASIC31.86■■■□□ 2.69
ZC3H6P61129 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
ZC3H6P61129 AC135279.3-201ENST00000610945 1311 ntBASIC31.85■■■□□ 2.69
ZC3H6P61129 SNX5-217ENST00000606557 1087 ntBASIC31.85■■■□□ 2.69
ZC3H6P61129 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
ZC3H6P61129 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ZC3H6P61129 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ZC3H6P61129 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
ZC3H6P61129 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.83■■■□□ 2.69
ZC3H6P61129 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.83■■■□□ 2.69
ZC3H6P61129 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.83■■■□□ 2.69
ZC3H6P61129 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
ZC3H6P61129 FOXO3B-201ENST00000395675 1928 ntBASIC31.83■■■□□ 2.69
ZC3H6P61129 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
ZC3H6P61129 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.82■■■□□ 2.68
ZC3H6P61129 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.82■■■□□ 2.68
ZC3H6P61129 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.82■■■□□ 2.68
ZC3H6P61129 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZC3H6P61129 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
ZC3H6P61129 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.8■■■□□ 2.68
ZC3H6P61129 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.8■■■□□ 2.68
ZC3H6P61129 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ZC3H6P61129 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.79■■■□□ 2.68
ZC3H6P61129 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ZC3H6P61129 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ZC3H6P61129 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ZC3H6P61129 MIR6722-201ENST00000617286 78 ntBASIC31.78■■■□□ 2.68
ZC3H6P61129 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.78■■■□□ 2.68
ZC3H6P61129 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ZC3H6P61129 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.78■■■□□ 2.68
ZC3H6P61129 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ZC3H6P61129 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ZC3H6P61129 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
ZC3H6P61129 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ZC3H6P61129 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.77■■■□□ 2.68
ZC3H6P61129 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.77■■■□□ 2.68
ZC3H6P61129 AC024257.2-201ENST00000549699 147 ntBASIC31.77■■■□□ 2.68
ZC3H6P61129 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
ZC3H6P61129 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
ZC3H6P61129 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ZC3H6P61129 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.76■■■□□ 2.67
ZC3H6P61129 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
ZC3H6P61129 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
ZC3H6P61129 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.76■■■□□ 2.67
ZC3H6P61129 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ZC3H6P61129 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ZC3H6P61129 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ZC3H6P61129 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.75■■■□□ 2.67
ZC3H6P61129 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ZC3H6P61129 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ZC3H6P61129 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ZC3H6P61129 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
ZC3H6P61129 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.74■■■□□ 2.67
ZC3H6P61129 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
ZC3H6P61129 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ZC3H6P61129 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ZC3H6P61129 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ZC3H6P61129 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ZC3H6P61129 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.72■■■□□ 2.67
ZC3H6P61129 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ZC3H6P61129 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.72■■■□□ 2.67
ZC3H6P61129 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ZC3H6P61129 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ZC3H6P61129 AC104564.3-201ENST00000582367 638 ntBASIC31.7■■■□□ 2.67
ZC3H6P61129 MIR5787-201ENST00000611784 55 ntBASIC31.7■■■□□ 2.67
ZC3H6P61129 AL355001.2-201ENST00000620617 1191 ntBASIC31.7■■■□□ 2.67
ZC3H6P61129 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ZC3H6P61129 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
ZC3H6P61129 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
ZC3H6P61129 EDA-201ENST00000338901 1233 ntBASIC31.69■■■□□ 2.66
ZC3H6P61129 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 SRD5A1P1-201ENST00000442297 786 ntBASIC31.69■■■□□ 2.66
ZC3H6P61129 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ZC3H6P61129 AC090877.2-201ENST00000558441 1738 ntBASIC31.69■■■□□ 2.66
ZC3H6P61129 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.68■■■□□ 2.66
ZC3H6P61129 AC105265.2-201ENST00000467189 838 ntBASIC31.68■■■□□ 2.66
ZC3H6P61129 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
ZC3H6P61129 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ZC3H6P61129 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.67■■■□□ 2.66
ZC3H6P61129 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ZC3H6P61129 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.67■■■□□ 2.66
ZC3H6P61129 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms