Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PER3P56645 TSPY9P-201ENST00000440215 945 ntBASIC21.54■■□□□ 1.04
PER3P56645 TSPY11P-201ENST00000442607 1045 ntBASIC21.54■■□□□ 1.04
PER3P56645 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.54■■□□□ 1.04
PER3P56645 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PER3P56645 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PER3P56645 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PER3P56645 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PER3P56645 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PER3P56645 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.53■■□□□ 1.04
PER3P56645 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.53■■□□□ 1.04
PER3P56645 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.53■■□□□ 1.04
PER3P56645 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.53■■□□□ 1.04
PER3P56645 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.53■■□□□ 1.04
PER3P56645 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PER3P56645 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PER3P56645 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.53■■□□□ 1.04
PER3P56645 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PER3P56645 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
PER3P56645 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.52■■□□□ 1.04
PER3P56645 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.52■■□□□ 1.04
PER3P56645 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PER3P56645 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PER3P56645 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PER3P56645 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
PER3P56645 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.51■■□□□ 1.03
PER3P56645 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.51■■□□□ 1.03
PER3P56645 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.51■■□□□ 1.03
PER3P56645 AC137630.3-201ENST00000607245 391 ntBASIC21.51■■□□□ 1.03
PER3P56645 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
PER3P56645 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.51■■□□□ 1.03
PER3P56645 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PER3P56645 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PER3P56645 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
PER3P56645 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PER3P56645 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PER3P56645 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PER3P56645 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.49■■□□□ 1.03
PER3P56645 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.49■■□□□ 1.03
PER3P56645 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PER3P56645 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PER3P56645 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PER3P56645 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PER3P56645 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.49■■□□□ 1.03
PER3P56645 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PER3P56645 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PER3P56645 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.48■■□□□ 1.03
PER3P56645 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PER3P56645 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PER3P56645 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PER3P56645 AC091060.1-201ENST00000623524 1766 ntBASIC21.47■■□□□ 1.03
PER3P56645 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.47■■□□□ 1.03
PER3P56645 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.47■■□□□ 1.03
PER3P56645 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PER3P56645 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.47■■□□□ 1.03
PER3P56645 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.47■■□□□ 1.03
PER3P56645 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.47■■□□□ 1.03
PER3P56645 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.47■■□□□ 1.03
PER3P56645 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PER3P56645 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
PER3P56645 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PER3P56645 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PER3P56645 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.46■■□□□ 1.03
PER3P56645 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.46■■□□□ 1.03
PER3P56645 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.46■■□□□ 1.03
PER3P56645 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PER3P56645 AC021242.3-201ENST00000607598 1377 ntBASIC21.46■■□□□ 1.03
PER3P56645 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PER3P56645 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PER3P56645 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.45■■□□□ 1.02
PER3P56645 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.45■■□□□ 1.02
PER3P56645 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.45■■□□□ 1.02
PER3P56645 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PER3P56645 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.45■■□□□ 1.02
PER3P56645 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.45■■□□□ 1.02
PER3P56645 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PER3P56645 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms