Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 ATP5G2P3-201ENST00000429083 425 ntBASIC28.8■■■□□ 2.2
PDE1AP54750 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.8■■■□□ 2.2
PDE1AP54750 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDE1AP54750 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
PDE1AP54750 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDE1AP54750 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.78■■■□□ 2.2
PDE1AP54750 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.78■■■□□ 2.2
PDE1AP54750 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
PDE1AP54750 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PDE1AP54750 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
PDE1AP54750 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PDE1AP54750 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE1AP54750 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE1AP54750 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE1AP54750 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
PDE1AP54750 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE1AP54750 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PDE1AP54750 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE1AP54750 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
PDE1AP54750 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
PDE1AP54750 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDE1AP54750 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.76■■■□□ 2.19
PDE1AP54750 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDE1AP54750 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDE1AP54750 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDE1AP54750 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.75■■■□□ 2.19
PDE1AP54750 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.75■■■□□ 2.19
PDE1AP54750 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDE1AP54750 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
PDE1AP54750 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDE1AP54750 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.75■■■□□ 2.19
PDE1AP54750 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PDE1AP54750 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDE1AP54750 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PDE1AP54750 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.74■■■□□ 2.19
PDE1AP54750 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDE1AP54750 LINC01124-201ENST00000409786 2117 ntBASIC28.73■■■□□ 2.19
PDE1AP54750 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDE1AP54750 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDE1AP54750 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.73■■■□□ 2.19
PDE1AP54750 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PDE1AP54750 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.73■■■□□ 2.19
PDE1AP54750 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
PDE1AP54750 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
PDE1AP54750 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PDE1AP54750 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDE1AP54750 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.72■■■□□ 2.19
PDE1AP54750 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
PDE1AP54750 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
PDE1AP54750 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.72■■■□□ 2.19
PDE1AP54750 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDE1AP54750 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDE1AP54750 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PDE1AP54750 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 TSPY13P-201ENST00000338964 914 ntBASIC28.71■■■□□ 2.19
PDE1AP54750 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.71■■■□□ 2.19
PDE1AP54750 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.71■■■□□ 2.19
PDE1AP54750 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PDE1AP54750 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.71■■■□□ 2.19
PDE1AP54750 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.71■■■□□ 2.19
PDE1AP54750 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PDE1AP54750 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PDE1AP54750 AL592295.1-201ENST00000400984 884 ntBASIC28.7■■■□□ 2.18
PDE1AP54750 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
PDE1AP54750 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.7■■■□□ 2.18
PDE1AP54750 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PDE1AP54750 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.7■■■□□ 2.18
PDE1AP54750 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
PDE1AP54750 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PDE1AP54750 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
PDE1AP54750 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDE1AP54750 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PDE1AP54750 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.69■■■□□ 2.18
PDE1AP54750 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDE1AP54750 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PDE1AP54750 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE1AP54750 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE1AP54750 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PDE1AP54750 AC019171.1-201ENST00000601251 1056 ntBASIC28.68■■■□□ 2.18
PDE1AP54750 AC012354.3-201ENST00000623734 483 ntBASIC28.68■■■□□ 2.18
PDE1AP54750 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PDE1AP54750 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDE1AP54750 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PDE1AP54750 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDE1AP54750 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.67■■■□□ 2.18
PDE1AP54750 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.67■■■□□ 2.18
PDE1AP54750 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
PDE1AP54750 HLA-L-211ENST00000482052 1765 ntBASIC28.67■■■□□ 2.18
PDE1AP54750 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.66■■■□□ 2.18
PDE1AP54750 AC139795.1-202ENST00000500444 432 ntBASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms