Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC25A1P53007 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC25A1P53007 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SLC25A1P53007 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC25A1P53007 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A1P53007 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A1P53007 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC25A1P53007 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
SLC25A1P53007 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC25A1P53007 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC25A1P53007 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC25A1P53007 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC25A1P53007 AC004812.2-201ENST00000611079 2094 ntBASIC20.84■□□□□ 0.93
SLC25A1P53007 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC25A1P53007 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC25A1P53007 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC25A1P53007 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC25A1P53007 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC25A1P53007 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC25A1P53007 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC25A1P53007 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC25A1P53007 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC25A1P53007 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC25A1P53007 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC25A1P53007 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC25A1P53007 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC25A1P53007 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC25A1P53007 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC25A1P53007 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC25A1P53007 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC25A1P53007 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC25A1P53007 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SLC25A1P53007 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC25A1P53007 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC25A1P53007 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC25A1P53007 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC25A1P53007 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC25A1P53007 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC25A1P53007 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC25A1P53007 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC25A1P53007 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC25A1P53007 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC25A1P53007 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC25A1P53007 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC25A1P53007 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC25A1P53007 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC25A1P53007 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC25A1P53007 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC25A1P53007 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC25A1P53007 AC009831.1-201ENST00000580420 1582 ntBASIC20.8■□□□□ 0.92
SLC25A1P53007 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC25A1P53007 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC25A1P53007 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC25A1P53007 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC25A1P53007 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC25A1P53007 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC25A1P53007 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC25A1P53007 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC25A1P53007 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC25A1P53007 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC25A1P53007 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC25A1P53007 AC133552.2-201ENST00000619106 1032 ntBASIC20.77■□□□□ 0.92
SLC25A1P53007 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC25A1P53007 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC25A1P53007 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SLC25A1P53007 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC25A1P53007 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms