Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDX1P52945 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDX1P52945 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDX1P52945 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDX1P52945 MIR935-201ENST00000401179 91 ntBASIC22.81■■□□□ 1.24
PDX1P52945 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.81■■□□□ 1.24
PDX1P52945 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PDX1P52945 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.81■■□□□ 1.24
PDX1P52945 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.81■■□□□ 1.24
PDX1P52945 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.8■■□□□ 1.24
PDX1P52945 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDX1P52945 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDX1P52945 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.8■■□□□ 1.24
PDX1P52945 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.8■■□□□ 1.24
PDX1P52945 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.8■■□□□ 1.24
PDX1P52945 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDX1P52945 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDX1P52945 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
PDX1P52945 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDX1P52945 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.79■■□□□ 1.24
PDX1P52945 AC011551.1-201ENST00000614101 683 ntBASIC22.79■■□□□ 1.24
PDX1P52945 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.79■■□□□ 1.24
PDX1P52945 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
PDX1P52945 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDX1P52945 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDX1P52945 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.78■■□□□ 1.24
PDX1P52945 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.78■■□□□ 1.24
PDX1P52945 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.78■■□□□ 1.24
PDX1P52945 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDX1P52945 AL117332.1-201ENST00000622628 974 ntBASIC22.78■■□□□ 1.24
PDX1P52945 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDX1P52945 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.77■■□□□ 1.24
PDX1P52945 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
PDX1P52945 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.77■■□□□ 1.24
PDX1P52945 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.77■■□□□ 1.24
PDX1P52945 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDX1P52945 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.77■■□□□ 1.24
PDX1P52945 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
PDX1P52945 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.77■■□□□ 1.24
PDX1P52945 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PDX1P52945 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.77■■□□□ 1.24
PDX1P52945 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PDX1P52945 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PDX1P52945 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.76■■□□□ 1.23
PDX1P52945 AC010997.5-201ENST00000609182 354 ntBASIC22.76■■□□□ 1.23
PDX1P52945 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.76■■□□□ 1.23
PDX1P52945 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PDX1P52945 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDX1P52945 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDX1P52945 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDX1P52945 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PDX1P52945 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDX1P52945 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDX1P52945 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDX1P52945 AL139246.5-201ENST00000606645 996 ntBASIC22.75■■□□□ 1.23
PDX1P52945 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.75■■□□□ 1.23
PDX1P52945 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.75■■□□□ 1.23
PDX1P52945 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PDX1P52945 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.75■■□□□ 1.23
PDX1P52945 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDX1P52945 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.74■■□□□ 1.23
PDX1P52945 AC092803.2-201ENST00000564287 1899 ntBASIC22.74■■□□□ 1.23
PDX1P52945 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
PDX1P52945 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDX1P52945 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.73■■□□□ 1.23
PDX1P52945 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PDX1P52945 MIR3621-201ENST00000580529 85 ntBASIC22.73■■□□□ 1.23
PDX1P52945 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PDX1P52945 AC145676.1-201ENST00000514988 2004 ntBASIC22.73■■□□□ 1.23
PDX1P52945 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDX1P52945 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PDX1P52945 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.72■■□□□ 1.23
PDX1P52945 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.72■■□□□ 1.23
PDX1P52945 AL136116.3-201ENST00000402907 1138 ntBASIC22.72■■□□□ 1.23
PDX1P52945 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.72■■□□□ 1.23
PDX1P52945 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.72■■□□□ 1.23
PDX1P52945 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PDX1P52945 MTDHP2-201ENST00000601468 714 ntBASIC22.72■■□□□ 1.23
PDX1P52945 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PDX1P52945 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDX1P52945 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDX1P52945 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PDX1P52945 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.71■■□□□ 1.23
PDX1P52945 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 MIR6724-1-201ENST00000616420 92 ntBASIC22.71■■□□□ 1.23
PDX1P52945 MIR6724-2-201ENST00000616483 92 ntBASIC22.71■■□□□ 1.23
PDX1P52945 MIR6724-4-201ENST00000617390 92 ntBASIC22.71■■□□□ 1.23
PDX1P52945 MIR6724-3-201ENST00000622482 92 ntBASIC22.71■■□□□ 1.23
PDX1P52945 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.71■■□□□ 1.23
PDX1P52945 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDX1P52945 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDX1P52945 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.7■■□□□ 1.22
PDX1P52945 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms