Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-1P43699 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-1P43699 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-1P43699 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NKX2-1P43699 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-1P43699 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-1P43699 RPS2P35-201ENST00000443417 897 ntBASIC19.1■□□□□ 0.65
NKX2-1P43699 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-1P43699 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-1P43699 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-1P43699 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-1P43699 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-1P43699 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-1P43699 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-1P43699 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
NKX2-1P43699 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-1P43699 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NKX2-1P43699 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-1P43699 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
NKX2-1P43699 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.08■□□□□ 0.65
NKX2-1P43699 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX2-1P43699 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-1P43699 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-1P43699 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX2-1P43699 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX2-1P43699 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NKX2-1P43699 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX2-1P43699 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-1P43699 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX2-1P43699 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-1P43699 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX2-1P43699 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX2-1P43699 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-1P43699 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-1P43699 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-1P43699 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-1P43699 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-1P43699 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NKX2-1P43699 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.04■□□□□ 0.64
NKX2-1P43699 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 MIR6089-201ENST00000616698 64 ntBASIC19.04■□□□□ 0.64
NKX2-1P43699 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX2-1P43699 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX2-1P43699 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L13-201ENST00000554103 1267 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L15-201ENST00000611059 1267 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L23-201ENST00000615195 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L24-201ENST00000617576 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 LINC01971-201ENST00000617888 1048 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L22-201ENST00000618238 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L20-201ENST00000619712 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L21-201ENST00000622058 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L10-201ENST00000622460 1267 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 DUX4L25-201ENST00000624915 1269 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX2-1P43699 C9orf163-202ENST00000624034 2573 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.03■□□□□ 0.64
NKX2-1P43699 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.03■□□□□ 0.64
NKX2-1P43699 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX2-1P43699 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NKX2-1P43699 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX2-1P43699 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms