Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.29■■□□□ 1.16
PTPN6P29350 AC009831.1-201ENST00000580420 1582 ntBASIC22.29■■□□□ 1.16
PTPN6P29350 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN6P29350 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN6P29350 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN6P29350 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN6P29350 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.28■■□□□ 1.16
PTPN6P29350 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN6P29350 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.27■■□□□ 1.16
PTPN6P29350 AC133552.2-201ENST00000619106 1032 ntBASIC22.27■■□□□ 1.16
PTPN6P29350 AC141586.4-201ENST00000624558 1573 ntBASIC22.27■■□□□ 1.16
PTPN6P29350 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN6P29350 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PTPN6P29350 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.26■■□□□ 1.15
PTPN6P29350 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN6P29350 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN6P29350 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.25■■□□□ 1.15
PTPN6P29350 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.25■■□□□ 1.15
PTPN6P29350 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PTPN6P29350 KRT18P60-201ENST00000312876 1297 ntBASIC22.25■■□□□ 1.15
PTPN6P29350 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.25■■□□□ 1.15
PTPN6P29350 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN6P29350 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN6P29350 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PTPN6P29350 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
PTPN6P29350 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PTPN6P29350 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.24■■□□□ 1.15
PTPN6P29350 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.24■■□□□ 1.15
PTPN6P29350 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.24■■□□□ 1.15
PTPN6P29350 RAP2CP1-202ENST00000605179 643 ntBASIC22.24■■□□□ 1.15
PTPN6P29350 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN6P29350 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.24■■□□□ 1.15
PTPN6P29350 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.24■■□□□ 1.15
PTPN6P29350 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTPN6P29350 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.23■■□□□ 1.15
PTPN6P29350 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTPN6P29350 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.23■■□□□ 1.15
PTPN6P29350 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTPN6P29350 AL592293.1-201ENST00000502889 1188 ntBASIC22.23■■□□□ 1.15
PTPN6P29350 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTPN6P29350 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PTPN6P29350 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
PTPN6P29350 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
PTPN6P29350 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTPN6P29350 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.22■■□□□ 1.15
PTPN6P29350 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.22■■□□□ 1.15
PTPN6P29350 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTPN6P29350 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTPN6P29350 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.22■■□□□ 1.15
PTPN6P29350 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTPN6P29350 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTPN6P29350 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.22■■□□□ 1.15
PTPN6P29350 AC004812.2-201ENST00000611079 2094 ntBASIC22.22■■□□□ 1.15
PTPN6P29350 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTPN6P29350 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PTPN6P29350 AC012354.3-201ENST00000623734 483 ntBASIC22.21■■□□□ 1.15
PTPN6P29350 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PTPN6P29350 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PTPN6P29350 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.2■■□□□ 1.14
PTPN6P29350 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTPN6P29350 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTPN6P29350 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.2■■□□□ 1.14
PTPN6P29350 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.2■■□□□ 1.14
PTPN6P29350 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.2■■□□□ 1.14
PTPN6P29350 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PTPN6P29350 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTPN6P29350 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTPN6P29350 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.19■■□□□ 1.14
PTPN6P29350 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTPN6P29350 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PTPN6P29350 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.18■■□□□ 1.14
PTPN6P29350 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTPN6P29350 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.18■■□□□ 1.14
PTPN6P29350 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTPN6P29350 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.18■■□□□ 1.14
PTPN6P29350 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN6P29350 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN6P29350 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PTPN6P29350 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN6P29350 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms