Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.5■■■□□ 2.47
KCNQ3O43525 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
KCNQ3O43525 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
KCNQ3O43525 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
KCNQ3O43525 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
KCNQ3O43525 AC092803.2-201ENST00000564287 1899 ntBASIC30.48■■■□□ 2.47
KCNQ3O43525 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.48■■■□□ 2.47
KCNQ3O43525 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.48■■■□□ 2.47
KCNQ3O43525 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.48■■■□□ 2.47
KCNQ3O43525 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
KCNQ3O43525 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.47■■■□□ 2.47
KCNQ3O43525 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNQ3O43525 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
KCNQ3O43525 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
KCNQ3O43525 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.47■■■□□ 2.47
KCNQ3O43525 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.47■■■□□ 2.47
KCNQ3O43525 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.47■■■□□ 2.47
KCNQ3O43525 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
KCNQ3O43525 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNQ3O43525 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNQ3O43525 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNQ3O43525 AC008406.3-201ENST00000620001 1374 ntBASIC30.46■■■□□ 2.47
KCNQ3O43525 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.46■■■□□ 2.47
KCNQ3O43525 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.46■■■□□ 2.47
KCNQ3O43525 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNQ3O43525 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KCNQ3O43525 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.46■■■□□ 2.47
KCNQ3O43525 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.45■■■□□ 2.47
KCNQ3O43525 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
KCNQ3O43525 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
KCNQ3O43525 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.45■■■□□ 2.46
KCNQ3O43525 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
KCNQ3O43525 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
KCNQ3O43525 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
KCNQ3O43525 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNQ3O43525 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNQ3O43525 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.44■■■□□ 2.46
KCNQ3O43525 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.44■■■□□ 2.46
KCNQ3O43525 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KCNQ3O43525 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KCNQ3O43525 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.43■■■□□ 2.46
KCNQ3O43525 AC010997.5-201ENST00000609182 354 ntBASIC30.43■■■□□ 2.46
KCNQ3O43525 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
KCNQ3O43525 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
KCNQ3O43525 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.42■■■□□ 2.46
KCNQ3O43525 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.42■■■□□ 2.46
KCNQ3O43525 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.42■■■□□ 2.46
KCNQ3O43525 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KCNQ3O43525 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KCNQ3O43525 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KCNQ3O43525 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.41■■■□□ 2.46
KCNQ3O43525 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.41■■■□□ 2.46
KCNQ3O43525 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.41■■■□□ 2.46
KCNQ3O43525 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KCNQ3O43525 AC090877.2-201ENST00000558441 1738 ntBASIC30.41■■■□□ 2.46
KCNQ3O43525 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.4■■■□□ 2.46
KCNQ3O43525 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KCNQ3O43525 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KCNQ3O43525 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.4■■■□□ 2.46
KCNQ3O43525 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KCNQ3O43525 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.4■■■□□ 2.46
KCNQ3O43525 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.4■■■□□ 2.46
KCNQ3O43525 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.4■■■□□ 2.46
KCNQ3O43525 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.39■■■□□ 2.46
KCNQ3O43525 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.39■■■□□ 2.46
KCNQ3O43525 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.39■■■□□ 2.46
KCNQ3O43525 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.39■■■□□ 2.46
KCNQ3O43525 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.39■■■□□ 2.46
KCNQ3O43525 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
KCNQ3O43525 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
KCNQ3O43525 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
KCNQ3O43525 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KCNQ3O43525 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KCNQ3O43525 AC131281.2-201ENST00000520478 145 ntBASIC30.38■■■□□ 2.45
KCNQ3O43525 AL117332.1-201ENST00000622628 974 ntBASIC30.38■■■□□ 2.45
KCNQ3O43525 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.38■■■□□ 2.45
KCNQ3O43525 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
KCNQ3O43525 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
KCNQ3O43525 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KCNQ3O43525 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
KCNQ3O43525 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.36■■■□□ 2.45
KCNQ3O43525 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.36■■■□□ 2.45
KCNQ3O43525 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KCNQ3O43525 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.36■■■□□ 2.45
KCNQ3O43525 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KCNQ3O43525 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
KCNQ3O43525 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.35■■■□□ 2.45
KCNQ3O43525 MTDHP2-201ENST00000601468 714 ntBASIC30.35■■■□□ 2.45
KCNQ3O43525 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KCNQ3O43525 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KCNQ3O43525 AC019069.1-201ENST00000610008 1333 ntBASIC30.34■■■□□ 2.45
KCNQ3O43525 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
KCNQ3O43525 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KCNQ3O43525 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.34■■■□□ 2.45
KCNQ3O43525 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.34■■■□□ 2.45
KCNQ3O43525 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.34■■■□□ 2.45
KCNQ3O43525 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.34■■■□□ 2.45
KCNQ3O43525 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KCNQ3O43525 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.33■■■□□ 2.45
KCNQ3O43525 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms