Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX4O43316 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PAX4O43316 AC087393.1-201ENST00000582896 145 ntBASIC16.64■□□□□ 0.25
PAX4O43316 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PAX4O43316 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PAX4O43316 AC020928.2-201ENST00000588717 2197 ntBASIC16.63■□□□□ 0.25
PAX4O43316 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PAX4O43316 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PAX4O43316 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX4O43316 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.62■□□□□ 0.25
PAX4O43316 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PAX4O43316 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.62■□□□□ 0.25
PAX4O43316 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.62■□□□□ 0.25
PAX4O43316 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.62■□□□□ 0.25
PAX4O43316 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PAX4O43316 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PAX4O43316 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAX4O43316 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.62■□□□□ 0.25
PAX4O43316 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.61■□□□□ 0.25
PAX4O43316 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PAX4O43316 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PAX4O43316 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PAX4O43316 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAX4O43316 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAX4O43316 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAX4O43316 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAX4O43316 AL033527.3-201ENST00000566366 1196 ntBASIC16.6■□□□□ 0.25
PAX4O43316 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PAX4O43316 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PAX4O43316 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PAX4O43316 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.59■□□□□ 0.25
PAX4O43316 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PAX4O43316 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.59■□□□□ 0.25
PAX4O43316 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.59■□□□□ 0.25
PAX4O43316 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.59■□□□□ 0.25
PAX4O43316 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PAX4O43316 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAX4O43316 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAX4O43316 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PAX4O43316 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAX4O43316 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PAX4O43316 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.58■□□□□ 0.25
PAX4O43316 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PAX4O43316 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.58■□□□□ 0.24
PAX4O43316 AC074183.2-201ENST00000623112 922 ntBASIC16.58■□□□□ 0.24
PAX4O43316 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAX4O43316 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PAX4O43316 FOXO3B-201ENST00000395675 1928 ntBASIC16.58■□□□□ 0.24
PAX4O43316 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.58■□□□□ 0.24
PAX4O43316 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PAX4O43316 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PAX4O43316 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.58■□□□□ 0.24
PAX4O43316 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 SLC6A10P-202ENST00000431994 2058 ntBASIC16.57■□□□□ 0.24
PAX4O43316 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PAX4O43316 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.57■□□□□ 0.24
PAX4O43316 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.57■□□□□ 0.24
PAX4O43316 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.57■□□□□ 0.24
PAX4O43316 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.57■□□□□ 0.24
PAX4O43316 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.57■□□□□ 0.24
PAX4O43316 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAX4O43316 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PAX4O43316 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAX4O43316 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PAX4O43316 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms