Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHF1O43189 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PHF1O43189 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.09■□□□□ 0.81
PHF1O43189 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.09■□□□□ 0.81
PHF1O43189 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.09■□□□□ 0.81
PHF1O43189 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHF1O43189 AC142381.3-201ENST00000568208 1670 ntBASIC20.09■□□□□ 0.81
PHF1O43189 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.08■□□□□ 0.81
PHF1O43189 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PHF1O43189 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHF1O43189 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.08■□□□□ 0.81
PHF1O43189 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.08■□□□□ 0.81
PHF1O43189 MIR4508-201ENST00000584178 70 ntBASIC20.08■□□□□ 0.81
PHF1O43189 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHF1O43189 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.07■□□□□ 0.8
PHF1O43189 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PHF1O43189 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.07■□□□□ 0.8
PHF1O43189 AL031848.2-201ENST00000607670 837 ntBASIC20.07■□□□□ 0.8
PHF1O43189 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.07■□□□□ 0.8
PHF1O43189 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.07■□□□□ 0.8
PHF1O43189 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHF1O43189 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHF1O43189 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PHF1O43189 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.06■□□□□ 0.8
PHF1O43189 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.06■□□□□ 0.8
PHF1O43189 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.05■□□□□ 0.8
PHF1O43189 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
PHF1O43189 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF1O43189 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF1O43189 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PHF1O43189 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHF1O43189 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHF1O43189 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.04■□□□□ 0.8
PHF1O43189 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF1O43189 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF1O43189 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF1O43189 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHF1O43189 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
PHF1O43189 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.03■□□□□ 0.8
PHF1O43189 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.03■□□□□ 0.8
PHF1O43189 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.03■□□□□ 0.8
PHF1O43189 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.03■□□□□ 0.8
PHF1O43189 AC103724.3-201ENST00000564481 992 ntBASIC20.03■□□□□ 0.8
PHF1O43189 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PHF1O43189 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHF1O43189 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHF1O43189 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHF1O43189 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHF1O43189 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHF1O43189 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PHF1O43189 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PHF1O43189 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF1O43189 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PHF1O43189 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF1O43189 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF1O43189 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.01■□□□□ 0.79
PHF1O43189 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.01■□□□□ 0.79
PHF1O43189 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PHF1O43189 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PHF1O43189 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF1O43189 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20■□□□□ 0.79
PHF1O43189 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF1O43189 AC022211.4-201ENST00000625094 2161 ntBASIC20■□□□□ 0.79
PHF1O43189 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.99■□□□□ 0.79
PHF1O43189 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PHF1O43189 AC239859.2-201ENST00000444165 318 ntBASIC19.99■□□□□ 0.79
PHF1O43189 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.99■□□□□ 0.79
PHF1O43189 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF1O43189 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.99■□□□□ 0.79
PHF1O43189 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF1O43189 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF1O43189 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PHF1O43189 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF1O43189 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF1O43189 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF1O43189 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms