Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD9O15198 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD9O15198 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD9O15198 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD9O15198 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
SMAD9O15198 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD9O15198 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 AC020928.2-201ENST00000588717 2197 ntBASIC21.15■□□□□ 0.98
SMAD9O15198 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD9O15198 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD9O15198 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMAD9O15198 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMAD9O15198 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMAD9O15198 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SMAD9O15198 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SMAD9O15198 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.14■□□□□ 0.97
SMAD9O15198 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.14■□□□□ 0.97
SMAD9O15198 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMAD9O15198 FOXO3B-201ENST00000395675 1928 ntBASIC21.14■□□□□ 0.97
SMAD9O15198 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD9O15198 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMAD9O15198 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD9O15198 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD9O15198 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD9O15198 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMAD9O15198 KRT8P33-201ENST00000508125 1423 ntBASIC21.12■□□□□ 0.97
SMAD9O15198 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.12■□□□□ 0.97
SMAD9O15198 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD9O15198 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD9O15198 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SMAD9O15198 AC103834.1-201ENST00000520383 144 ntBASIC21.12■□□□□ 0.97
SMAD9O15198 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.12■□□□□ 0.97
SMAD9O15198 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.12■□□□□ 0.97
SMAD9O15198 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD9O15198 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMAD9O15198 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SMAD9O15198 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD9O15198 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD9O15198 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD9O15198 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMAD9O15198 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.11■□□□□ 0.97
SMAD9O15198 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMAD9O15198 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SMAD9O15198 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD9O15198 SLC6A10P-202ENST00000431994 2058 ntBASIC21.1■□□□□ 0.97
SMAD9O15198 AL592295.1-201ENST00000400984 884 ntBASIC21.1■□□□□ 0.97
SMAD9O15198 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SMAD9O15198 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.1■□□□□ 0.97
SMAD9O15198 MIR4508-201ENST00000584178 70 ntBASIC21.1■□□□□ 0.97
SMAD9O15198 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.1■□□□□ 0.97
SMAD9O15198 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD9O15198 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD9O15198 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD9O15198 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMAD9O15198 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.09■□□□□ 0.97
SMAD9O15198 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.09■□□□□ 0.97
SMAD9O15198 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD9O15198 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
SMAD9O15198 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.97
SMAD9O15198 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMAD9O15198 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMAD9O15198 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SMAD9O15198 RARRES2P1-201ENST00000474487 481 ntBASIC21.08■□□□□ 0.97
SMAD9O15198 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.08■□□□□ 0.97
SMAD9O15198 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMAD9O15198 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.08■□□□□ 0.96
SMAD9O15198 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.08■□□□□ 0.96
SMAD9O15198 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMAD9O15198 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
SMAD9O15198 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD9O15198 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMAD9O15198 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD9O15198 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SMAD9O15198 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.07■□□□□ 0.96
SMAD9O15198 YBX1P4-201ENST00000392794 808 ntBASIC21.07■□□□□ 0.96
SMAD9O15198 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.07■□□□□ 0.96
SMAD9O15198 AC022616.5-201ENST00000518796 181 ntBASIC21.07■□□□□ 0.96
SMAD9O15198 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD9O15198 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.06■□□□□ 0.96
SMAD9O15198 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD9O15198 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD9O15198 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD9O15198 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD9O15198 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMAD9O15198 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.05■□□□□ 0.96
SMAD9O15198 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms