Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 KRT18P24-201ENST00000344739 1156 ntBASIC21.1■□□□□ 0.97
TNFSF11O14788 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFSF11O14788 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFSF11O14788 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFSF11O14788 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.09■□□□□ 0.97
TNFSF11O14788 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.09■□□□□ 0.97
TNFSF11O14788 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF11O14788 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.09■□□□□ 0.97
TNFSF11O14788 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFSF11O14788 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFSF11O14788 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TNFSF11O14788 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF11O14788 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFSF11O14788 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF11O14788 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF11O14788 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFSF11O14788 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFSF11O14788 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TNFSF11O14788 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF11O14788 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFSF11O14788 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.07■□□□□ 0.96
TNFSF11O14788 AC011551.1-201ENST00000614101 683 ntBASIC21.07■□□□□ 0.96
TNFSF11O14788 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFSF11O14788 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TNFSF11O14788 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFSF11O14788 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.06■□□□□ 0.96
TNFSF11O14788 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFSF11O14788 AC020928.2-201ENST00000588717 2197 ntBASIC21.06■□□□□ 0.96
TNFSF11O14788 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.06■□□□□ 0.96
TNFSF11O14788 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.06■□□□□ 0.96
TNFSF11O14788 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFSF11O14788 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TNFSF11O14788 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFSF11O14788 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFSF11O14788 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFSF11O14788 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF11O14788 AC009299.2-201ENST00000482477 511 ntBASIC21.05■□□□□ 0.96
TNFSF11O14788 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF11O14788 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF11O14788 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNFSF11O14788 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TNFSF11O14788 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFSF11O14788 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF11O14788 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFSF11O14788 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF11O14788 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TNFSF11O14788 AC090877.2-201ENST00000558441 1738 ntBASIC21.04■□□□□ 0.96
TNFSF11O14788 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNFSF11O14788 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF11O14788 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFSF11O14788 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFSF11O14788 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNFSF11O14788 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
TNFSF11O14788 AC022211.4-201ENST00000625094 2161 ntBASIC21.03■□□□□ 0.96
TNFSF11O14788 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF11O14788 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF11O14788 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF11O14788 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFSF11O14788 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TNFSF11O14788 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFSF11O14788 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TNFSF11O14788 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF11O14788 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF11O14788 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF11O14788 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF11O14788 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.01■□□□□ 0.95
TNFSF11O14788 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.01■□□□□ 0.95
TNFSF11O14788 MIR4281-201ENST00000580852 62 ntBASIC21.01■□□□□ 0.95
TNFSF11O14788 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF11O14788 AL035685.1-201ENST00000636663 812 ntBASIC21.01■□□□□ 0.95
TNFSF11O14788 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF11O14788 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF11O14788 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21■□□□□ 0.95
TNFSF11O14788 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms