Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDX4O14627 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.03■■□□□ 1.28
CDX4O14627 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDX4O14627 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDX4O14627 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDX4O14627 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.02■■□□□ 1.28
CDX4O14627 AF213884.3-201ENST00000563833 479 ntBASIC23.02■■□□□ 1.28
CDX4O14627 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.02■■□□□ 1.28
CDX4O14627 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDX4O14627 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDX4O14627 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDX4O14627 AC097381.1-201ENST00000429019 1296 ntBASIC23.01■■□□□ 1.27
CDX4O14627 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.01■■□□□ 1.27
CDX4O14627 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.01■■□□□ 1.27
CDX4O14627 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.01■■□□□ 1.27
CDX4O14627 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDX4O14627 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23■■□□□ 1.27
CDX4O14627 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
CDX4O14627 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CDX4O14627 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CDX4O14627 MIR939-201ENST00000401314 82 ntBASIC23■■□□□ 1.27
CDX4O14627 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDX4O14627 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23■■□□□ 1.27
CDX4O14627 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23■■□□□ 1.27
CDX4O14627 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDX4O14627 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDX4O14627 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.99■■□□□ 1.27
CDX4O14627 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDX4O14627 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.98■■□□□ 1.27
CDX4O14627 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CDX4O14627 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.98■■□□□ 1.27
CDX4O14627 AP004609.3-201ENST00000610705 1884 ntBASIC22.98■■□□□ 1.27
CDX4O14627 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDX4O14627 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.98■■□□□ 1.27
CDX4O14627 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDX4O14627 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDX4O14627 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDX4O14627 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDX4O14627 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CDX4O14627 AP001330.3-201ENST00000520123 633 ntBASIC22.97■■□□□ 1.27
CDX4O14627 AC087623.3-201ENST00000607047 1098 ntBASIC22.97■■□□□ 1.27
CDX4O14627 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.97■■□□□ 1.27
CDX4O14627 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDX4O14627 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDX4O14627 AL162430.1-201ENST00000480705 870 ntBASIC22.96■■□□□ 1.27
CDX4O14627 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CDX4O14627 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CDX4O14627 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.95■■□□□ 1.26
CDX4O14627 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDX4O14627 FOXO3B-201ENST00000395675 1928 ntBASIC22.94■■□□□ 1.26
CDX4O14627 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDX4O14627 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDX4O14627 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.94■■□□□ 1.26
CDX4O14627 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDX4O14627 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDX4O14627 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDX4O14627 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.93■■□□□ 1.26
CDX4O14627 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CDX4O14627 AC091305.1-201ENST00000479476 895 ntBASIC22.93■■□□□ 1.26
CDX4O14627 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.93■■□□□ 1.26
CDX4O14627 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.93■■□□□ 1.26
CDX4O14627 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.93■■□□□ 1.26
CDX4O14627 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.92■■□□□ 1.26
CDX4O14627 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CDX4O14627 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDX4O14627 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDX4O14627 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDX4O14627 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDX4O14627 DUX4L19-201ENST00000557448 1267 ntBASIC22.91■■□□□ 1.26
CDX4O14627 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDX4O14627 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDX4O14627 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDX4O14627 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.9■■□□□ 1.26
CDX4O14627 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDX4O14627 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.89■■□□□ 1.26
CDX4O14627 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDX4O14627 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDX4O14627 AC004448.1-201ENST00000458332 883 ntBASIC22.89■■□□□ 1.25
CDX4O14627 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
CDX4O14627 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDX4O14627 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.89■■□□□ 1.25
CDX4O14627 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CDX4O14627 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDX4O14627 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDX4O14627 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDX4O14627 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.88■■□□□ 1.25
CDX4O14627 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.88■■□□□ 1.25
CDX4O14627 AC090877.2-201ENST00000558441 1738 ntBASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms