Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 KRT16P3-201ENST00000439127 1283 ntBASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 AL139246.5-201ENST00000606645 996 ntBASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.78■■□□□ 1.4
UPK3BL1B0FP48 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPK3BL1B0FP48 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UPK3BL1B0FP48 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 FOXO3B-201ENST00000395675 1928 ntBASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
UPK3BL1B0FP48 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 KRT18P24-201ENST00000344739 1156 ntBASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
UPK3BL1B0FP48 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UPK3BL1B0FP48 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 AC137630.3-201ENST00000607245 391 ntBASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
UPK3BL1B0FP48 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UPK3BL1B0FP48 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UPK3BL1B0FP48 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
UPK3BL1B0FP48 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UPK3BL1B0FP48 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
UPK3BL1B0FP48 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 AC120024.1-201ENST00000562672 995 ntBASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
UPK3BL1B0FP48 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPK3BL1B0FP48 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPK3BL1B0FP48 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPK3BL1B0FP48 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPK3BL1B0FP48 AC021242.3-201ENST00000607598 1377 ntBASIC23.66■■□□□ 1.38
UPK3BL1B0FP48 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPK3BL1B0FP48 AC011551.1-201ENST00000614101 683 ntBASIC23.66■■□□□ 1.38
UPK3BL1B0FP48 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
UPK3BL1B0FP48 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPK3BL1B0FP48 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms