Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM4A7MD48 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM4A7MD48 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SRRM4A7MD48 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM4A7MD48 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM4A7MD48 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM4A7MD48 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SRRM4A7MD48 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM4A7MD48 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM4A7MD48 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.88■□□□□ 0.61
SRRM4A7MD48 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM4A7MD48 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SRRM4A7MD48 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRRM4A7MD48 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRRM4A7MD48 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM4A7MD48 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.88■□□□□ 0.61
SRRM4A7MD48 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM4A7MD48 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM4A7MD48 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM4A7MD48 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM4A7MD48 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM4A7MD48 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.87■□□□□ 0.61
SRRM4A7MD48 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM4A7MD48 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRRM4A7MD48 LINC00543-201ENST00000567234 1845 ntBASIC18.87■□□□□ 0.61
SRRM4A7MD48 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
SRRM4A7MD48 AC018755.3-202ENST00000596210 929 ntBASIC18.87■□□□□ 0.61
SRRM4A7MD48 U85056.1-201ENST00000616429 682 ntBASIC18.87■□□□□ 0.61
SRRM4A7MD48 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRRM4A7MD48 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM4A7MD48 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM4A7MD48 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM4A7MD48 RPS2P7-201ENST00000447334 885 ntBASIC18.86■□□□□ 0.61
SRRM4A7MD48 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.86■□□□□ 0.61
SRRM4A7MD48 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM4A7MD48 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM4A7MD48 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SRRM4A7MD48 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM4A7MD48 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM4A7MD48 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM4A7MD48 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM4A7MD48 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM4A7MD48 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM4A7MD48 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.84■□□□□ 0.61
SRRM4A7MD48 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SRRM4A7MD48 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SRRM4A7MD48 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM4A7MD48 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM4A7MD48 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRRM4A7MD48 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRRM4A7MD48 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.84■□□□□ 0.61
SRRM4A7MD48 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM4A7MD48 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM4A7MD48 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM4A7MD48 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM4A7MD48 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRRM4A7MD48 DUX4L9-201ENST00000449051 1259 ntBASIC18.83■□□□□ 0.6
SRRM4A7MD48 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SRRM4A7MD48 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.83■□□□□ 0.6
SRRM4A7MD48 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRRM4A7MD48 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SRRM4A7MD48 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.82■□□□□ 0.6
SRRM4A7MD48 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SRRM4A7MD48 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.82■□□□□ 0.6
SRRM4A7MD48 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.82■□□□□ 0.6
SRRM4A7MD48 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 HLA-L-211ENST00000482052 1765 ntBASIC18.82■□□□□ 0.6
SRRM4A7MD48 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRRM4A7MD48 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.82■□□□□ 0.6
SRRM4A7MD48 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
SRRM4A7MD48 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRRM4A7MD48 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRRM4A7MD48 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRRM4A7MD48 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRRM4A7MD48 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRRM4A7MD48 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRRM4A7MD48 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.8■□□□□ 0.6
SRRM4A7MD48 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.8■□□□□ 0.6
SRRM4A7MD48 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SRRM4A7MD48 AC087393.1-201ENST00000582896 145 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms