Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01548A6NM66 AC120024.1-201ENST00000562672 995 ntBASIC18.58■□□□□ 0.56
LINC01548A6NM66 AL031848.2-201ENST00000607670 837 ntBASIC18.58■□□□□ 0.56
LINC01548A6NM66 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01548A6NM66 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01548A6NM66 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01548A6NM66 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LINC01548A6NM66 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01548A6NM66 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01548A6NM66 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01548A6NM66 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC01548A6NM66 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01548A6NM66 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01548A6NM66 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LINC01548A6NM66 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01548A6NM66 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01548A6NM66 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LINC01548A6NM66 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LINC01548A6NM66 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01548A6NM66 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01548A6NM66 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01548A6NM66 KRT18P24-201ENST00000344739 1156 ntBASIC18.56■□□□□ 0.56
LINC01548A6NM66 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01548A6NM66 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01548A6NM66 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01548A6NM66 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LINC01548A6NM66 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01548A6NM66 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01548A6NM66 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01548A6NM66 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01548A6NM66 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01548A6NM66 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01548A6NM66 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC01548A6NM66 THA1P-201ENST00000590384 1145 ntBASIC18.54■□□□□ 0.56
LINC01548A6NM66 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LINC01548A6NM66 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 AC022211.4-201ENST00000625094 2161 ntBASIC18.54■□□□□ 0.56
LINC01548A6NM66 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01548A6NM66 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01548A6NM66 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01548A6NM66 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01548A6NM66 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LINC01548A6NM66 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
LINC01548A6NM66 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01548A6NM66 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LINC01548A6NM66 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01548A6NM66 AC009299.2-201ENST00000482477 511 ntBASIC18.52■□□□□ 0.56
LINC01548A6NM66 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01548A6NM66 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.52■□□□□ 0.56
LINC01548A6NM66 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01548A6NM66 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01548A6NM66 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
LINC01548A6NM66 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01548A6NM66 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.51■□□□□ 0.55
LINC01548A6NM66 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LINC01548A6NM66 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01548A6NM66 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01548A6NM66 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LINC01548A6NM66 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 AC090877.2-201ENST00000558441 1738 ntBASIC18.5■□□□□ 0.55
LINC01548A6NM66 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 AL035685.1-201ENST00000636663 812 ntBASIC18.5■□□□□ 0.55
LINC01548A6NM66 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01548A6NM66 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01548A6NM66 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LINC01548A6NM66 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01548A6NM66 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.49■□□□□ 0.55
LINC01548A6NM66 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01548A6NM66 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01548A6NM66 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms