Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3L4A6NDZ8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD3L4A6NDZ8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.85■□□□□ 0.93
MBD3L4A6NDZ8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.85■□□□□ 0.93
MBD3L4A6NDZ8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 MTDHP2-201ENST00000601468 714 ntBASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 AC010997.5-201ENST00000609182 354 ntBASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD3L4A6NDZ8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3L4A6NDZ8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MBD3L4A6NDZ8 AC019069.1-201ENST00000610008 1333 ntBASIC20.83■□□□□ 0.93
MBD3L4A6NDZ8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD3L4A6NDZ8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.83■□□□□ 0.93
MBD3L4A6NDZ8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MBD3L4A6NDZ8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
MBD3L4A6NDZ8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MBD3L4A6NDZ8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 AC008406.3-201ENST00000620001 1374 ntBASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD3L4A6NDZ8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3L4A6NDZ8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 MIR6724-1-201ENST00000616420 92 ntBASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 MIR6724-2-201ENST00000616483 92 ntBASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 MIR6724-4-201ENST00000617390 92 ntBASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 MIR6724-3-201ENST00000622482 92 ntBASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MBD3L4A6NDZ8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD3L4A6NDZ8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD3L4A6NDZ8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3L4A6NDZ8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD3L4A6NDZ8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
MBD3L4A6NDZ8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD3L4A6NDZ8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3L4A6NDZ8 AL117332.1-201ENST00000622628 974 ntBASIC20.76■□□□□ 0.91
MBD3L4A6NDZ8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3L4A6NDZ8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MBD3L4A6NDZ8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MBD3L4A6NDZ8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 MIR3621-201ENST00000580529 85 ntBASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MBD3L4A6NDZ8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms