Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00854A0A1B0GVQ3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00854A0A1B0GVQ3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00854A0A1B0GVQ3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC004812.2-201ENST00000611079 2094 ntBASIC20.52■□□□□ 0.87
LINC00854A0A1B0GVQ3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.52■□□□□ 0.87
LINC00854A0A1B0GVQ3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.52■□□□□ 0.87
LINC00854A0A1B0GVQ3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00854A0A1B0GVQ3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 AL024507.2-201ENST00000606070 2574 ntBASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00854A0A1B0GVQ3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LINC00854A0A1B0GVQ3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00854A0A1B0GVQ3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 AC141586.4-201ENST00000624558 1573 ntBASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00854A0A1B0GVQ3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 LINC00273-201ENST00000539813 1452 ntBASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00854A0A1B0GVQ3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00854A0A1B0GVQ3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00854A0A1B0GVQ3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00854A0A1B0GVQ3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00854A0A1B0GVQ3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00854A0A1B0GVQ3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms