Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV25A0A0B4J276 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.64■□□□□ 0.42
TRAV25A0A0B4J276 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV25A0A0B4J276 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV25A0A0B4J276 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV25A0A0B4J276 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV25A0A0B4J276 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.64■□□□□ 0.41
TRAV25A0A0B4J276 SLC6A10P-202ENST00000431994 2058 ntBASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV25A0A0B4J276 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 MIR6089-201ENST00000616698 64 ntBASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV25A0A0B4J276 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV25A0A0B4J276 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV25A0A0B4J276 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV25A0A0B4J276 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV25A0A0B4J276 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV25A0A0B4J276 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV25A0A0B4J276 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 MIR4281-201ENST00000580852 62 ntBASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV25A0A0B4J276 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV25A0A0B4J276 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV25A0A0B4J276 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV25A0A0B4J276 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV25A0A0B4J276 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 Z92544.1-202ENST00000571933 1220 ntBASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 AL451085.2-201ENST00000605085 799 ntBASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV25A0A0B4J276 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 BX664725.1-201ENST00000438252 379 ntBASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 AC137630.3-201ENST00000607245 391 ntBASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV25A0A0B4J276 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 AC009299.2-201ENST00000482477 511 ntBASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAV25A0A0B4J276 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV25A0A0B4J276 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms