Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-6A0A0B4J262 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 AL139125.2-201ENST00000623134 1869 ntBASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV8-6A0A0B4J262 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-6A0A0B4J262 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-6A0A0B4J262 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-6A0A0B4J262 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRAV8-6A0A0B4J262 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-6A0A0B4J262 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-6A0A0B4J262 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-6A0A0B4J262 AP004609.3-201ENST00000610705 1884 ntBASIC17.02■□□□□ 0.32
TRAV8-6A0A0B4J262 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-6A0A0B4J262 C9orf163-202ENST00000624034 2573 ntBASIC17.02■□□□□ 0.31
TRAV8-6A0A0B4J262 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV8-6A0A0B4J262 AL359258.2-201ENST00000564063 1566 ntBASIC17.02■□□□□ 0.31
TRAV8-6A0A0B4J262 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-6A0A0B4J262 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-6A0A0B4J262 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-6A0A0B4J262 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-6A0A0B4J262 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-6A0A0B4J262 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-6A0A0B4J262 MIR4449-201ENST00000578365 66 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms