Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RARRES2P2-201ENST00000394842 485 ntBASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 AC025884.2-201ENST00000553429 711 ntBASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PKD1P6-201ENST00000343738 4769 ntBASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 LINC01124-201ENST00000409786 2117 ntBASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 AC012676.1-201ENST00000574705 1949 ntBASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 AC007029.1-201ENST00000604183 313 ntBASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 RP9P-202ENST00000450133 1212 ntBASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 AC096887.2-201ENST00000623443 1957 ntBASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-3A0A0A6YYJ7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV8-3A0A0A6YYJ7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms