Protein–RNA interactions for Protein: Q9Y6U7

RNF215, RING finger protein 215, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF215Q9Y6U7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNF215Q9Y6U7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF215Q9Y6U7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF215Q9Y6U7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RNF215Q9Y6U7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.33■■■□□ 2.13
RNF215Q9Y6U7 AL031258.1-201ENST00000623562 325 ntBASIC28.31■■■□□ 2.12
RNF215Q9Y6U7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
RNF215Q9Y6U7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RNF215Q9Y6U7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF215Q9Y6U7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.24■■■□□ 2.11
RNF215Q9Y6U7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RNF215Q9Y6U7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF215Q9Y6U7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF215Q9Y6U7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF215Q9Y6U7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.14■■■□□ 2.1
RNF215Q9Y6U7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RNF215Q9Y6U7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.1■■■□□ 2.09
RNF215Q9Y6U7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.1■■■□□ 2.09
RNF215Q9Y6U7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.06■■■□□ 2.08
RNF215Q9Y6U7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF215Q9Y6U7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
RNF215Q9Y6U7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RNF215Q9Y6U7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RNF215Q9Y6U7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF215Q9Y6U7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
RNF215Q9Y6U7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.97■■■□□ 2.07
RNF215Q9Y6U7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RNF215Q9Y6U7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.95■■■□□ 2.06
RNF215Q9Y6U7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.95■■■□□ 2.06
RNF215Q9Y6U7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RNF215Q9Y6U7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.88■■■□□ 2.05
RNF215Q9Y6U7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.87■■■□□ 2.05
RNF215Q9Y6U7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF215Q9Y6U7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF215Q9Y6U7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.86■■■□□ 2.05
RNF215Q9Y6U7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RNF215Q9Y6U7 RARRES2P7-201ENST00000567349 469 ntBASIC27.8■■■□□ 2.04
RNF215Q9Y6U7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.78■■■□□ 2.04
RNF215Q9Y6U7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RNF215Q9Y6U7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
RNF215Q9Y6U7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF215Q9Y6U7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RNF215Q9Y6U7 AC145285.7-201ENST00000614819 1539 ntBASIC27.74■■■□□ 2.03
RNF215Q9Y6U7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.73■■■□□ 2.03
RNF215Q9Y6U7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RNF215Q9Y6U7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.72■■■□□ 2.03
RNF215Q9Y6U7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
RNF215Q9Y6U7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.7■■■□□ 2.03
RNF215Q9Y6U7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
RNF215Q9Y6U7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.7■■■□□ 2.02
RNF215Q9Y6U7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.7■■■□□ 2.02
RNF215Q9Y6U7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.69■■■□□ 2.02
RNF215Q9Y6U7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
RNF215Q9Y6U7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RNF215Q9Y6U7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.65■■■□□ 2.02
RNF215Q9Y6U7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.64■■■□□ 2.02
RNF215Q9Y6U7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.62■■■□□ 2.01
RNF215Q9Y6U7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.61■■■□□ 2.01
RNF215Q9Y6U7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
RNF215Q9Y6U7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.6■■■□□ 2.01
RNF215Q9Y6U7 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.6■■■□□ 2.01
RNF215Q9Y6U7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.59■■■□□ 2.01
RNF215Q9Y6U7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF215Q9Y6U7 SETD8P1-201ENST00000623146 1180 ntBASIC27.57■■■□□ 2
RNF215Q9Y6U7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.56■■■□□ 2
RNF215Q9Y6U7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RNF215Q9Y6U7 AC097358.2-201ENST00000607541 1159 ntBASIC27.55■■■□□ 2
RNF215Q9Y6U7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.54■■■□□ 2
RNF215Q9Y6U7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RNF215Q9Y6U7 AC136428.2-201ENST00000563187 214 ntBASIC27.49■■□□□ 1.99
RNF215Q9Y6U7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
RNF215Q9Y6U7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RNF215Q9Y6U7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
RNF215Q9Y6U7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
RNF215Q9Y6U7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RNF215Q9Y6U7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RNF215Q9Y6U7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RNF215Q9Y6U7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RNF215Q9Y6U7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.41■■□□□ 1.98
RNF215Q9Y6U7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.41■■□□□ 1.98
RNF215Q9Y6U7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.38■■□□□ 1.97
RNF215Q9Y6U7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RNF215Q9Y6U7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF215Q9Y6U7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF215Q9Y6U7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.35■■□□□ 1.97
RNF215Q9Y6U7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.35■■□□□ 1.97
RNF215Q9Y6U7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.34■■□□□ 1.97
RNF215Q9Y6U7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF215Q9Y6U7 SUZ12P1-203ENST00000578195 985 ntBASIC27.31■■□□□ 1.96
RNF215Q9Y6U7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF215Q9Y6U7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF215Q9Y6U7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF215Q9Y6U7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF215Q9Y6U7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.25■■□□□ 1.95
RNF215Q9Y6U7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RNF215Q9Y6U7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF215Q9Y6U7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
RNF215Q9Y6U7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF215Q9Y6U7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF215Q9Y6U7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms