Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
SLC4A7Q9Y6M7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SLC4A7Q9Y6M7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.25■■■□□ 2.75
SLC4A7Q9Y6M7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.25■■■□□ 2.75
SLC4A7Q9Y6M7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.25■■■□□ 2.75
SLC4A7Q9Y6M7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.22■■■□□ 2.75
SLC4A7Q9Y6M7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.17■■■□□ 2.74
SLC4A7Q9Y6M7 RARRES2P7-201ENST00000567349 469 ntBASIC32.14■■■□□ 2.74
SLC4A7Q9Y6M7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.13■■■□□ 2.73
SLC4A7Q9Y6M7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.11■■■□□ 2.73
SLC4A7Q9Y6M7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
SLC4A7Q9Y6M7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.09■■■□□ 2.73
SLC4A7Q9Y6M7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC4A7Q9Y6M7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SLC4A7Q9Y6M7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
SLC4A7Q9Y6M7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC4A7Q9Y6M7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC4A7Q9Y6M7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.72
SLC4A7Q9Y6M7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.01■■■□□ 2.71
SLC4A7Q9Y6M7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SLC4A7Q9Y6M7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.91■■■□□ 2.7
SLC4A7Q9Y6M7 AC097358.2-201ENST00000607541 1159 ntBASIC31.91■■■□□ 2.7
SLC4A7Q9Y6M7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.88■■■□□ 2.69
SLC4A7Q9Y6M7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SLC4A7Q9Y6M7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.83■■■□□ 2.69
SLC4A7Q9Y6M7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.83■■■□□ 2.69
SLC4A7Q9Y6M7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.78■■■□□ 2.68
SLC4A7Q9Y6M7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC4A7Q9Y6M7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC4A7Q9Y6M7 SETD8P1-201ENST00000623146 1180 ntBASIC31.75■■■□□ 2.67
SLC4A7Q9Y6M7 AC136428.2-201ENST00000563187 214 ntBASIC31.74■■■□□ 2.67
SLC4A7Q9Y6M7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLC4A7Q9Y6M7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.71■■■□□ 2.67
SLC4A7Q9Y6M7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.7■■■□□ 2.67
SLC4A7Q9Y6M7 RPS2P35-201ENST00000443417 897 ntBASIC31.7■■■□□ 2.67
SLC4A7Q9Y6M7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SLC4A7Q9Y6M7 SUZ12P1-203ENST00000578195 985 ntBASIC31.66■■■□□ 2.66
SLC4A7Q9Y6M7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SLC4A7Q9Y6M7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.63■■■□□ 2.65
SLC4A7Q9Y6M7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SLC4A7Q9Y6M7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.59■■■□□ 2.65
SLC4A7Q9Y6M7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.59■■■□□ 2.65
SLC4A7Q9Y6M7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SLC4A7Q9Y6M7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.57■■■□□ 2.64
SLC4A7Q9Y6M7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SLC4A7Q9Y6M7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
SLC4A7Q9Y6M7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.53■■■□□ 2.64
SLC4A7Q9Y6M7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC4A7Q9Y6M7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SLC4A7Q9Y6M7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.51■■■□□ 2.63
SLC4A7Q9Y6M7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SLC4A7Q9Y6M7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SLC4A7Q9Y6M7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SLC4A7Q9Y6M7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SLC4A7Q9Y6M7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SLC4A7Q9Y6M7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.44■■■□□ 2.62
SLC4A7Q9Y6M7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC4A7Q9Y6M7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
SLC4A7Q9Y6M7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC4A7Q9Y6M7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.43■■■□□ 2.62
SLC4A7Q9Y6M7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC4A7Q9Y6M7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC4A7Q9Y6M7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.37■■■□□ 2.61
SLC4A7Q9Y6M7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
SLC4A7Q9Y6M7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLC4A7Q9Y6M7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SLC4A7Q9Y6M7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SLC4A7Q9Y6M7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SLC4A7Q9Y6M7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
SLC4A7Q9Y6M7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SLC4A7Q9Y6M7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SLC4A7Q9Y6M7 CAHM-201ENST00000604200 896 ntBASIC31.15■■■□□ 2.58
SLC4A7Q9Y6M7 AL162393.1-201ENST00000437852 946 ntBASIC31.14■■■□□ 2.58
SLC4A7Q9Y6M7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.13■■■□□ 2.57
SLC4A7Q9Y6M7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
SLC4A7Q9Y6M7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.11■■■□□ 2.57
SLC4A7Q9Y6M7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC4A7Q9Y6M7 AP006261.1-201ENST00000584783 668 ntBASIC31.1■■■□□ 2.57
SLC4A7Q9Y6M7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
SLC4A7Q9Y6M7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SLC4A7Q9Y6M7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SLC4A7Q9Y6M7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
SLC4A7Q9Y6M7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.06■■■□□ 2.56
SLC4A7Q9Y6M7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.05■■■□□ 2.56
SLC4A7Q9Y6M7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.05■■■□□ 2.56
SLC4A7Q9Y6M7 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.04■■■□□ 2.56
SLC4A7Q9Y6M7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.03■■■□□ 2.56
SLC4A7Q9Y6M7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC4A7Q9Y6M7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SLC4A7Q9Y6M7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
SLC4A7Q9Y6M7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.02■■■□□ 2.56
SLC4A7Q9Y6M7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC4A7Q9Y6M7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC4A7Q9Y6M7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC4A7Q9Y6M7 AL391121.1-201ENST00000607967 1349 ntBASIC30.98■■■□□ 2.55
SLC4A7Q9Y6M7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.95■■■□□ 2.54
SLC4A7Q9Y6M7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC4A7Q9Y6M7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.92■■■□□ 2.54
SLC4A7Q9Y6M7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SLC4A7Q9Y6M7 AC145285.7-201ENST00000614819 1539 ntBASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms