Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ZFYVE28Q9HCC9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.38■■■■□ 3.09
ZFYVE28Q9HCC9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.38■■■■□ 3.09
ZFYVE28Q9HCC9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC34.37■■■■□ 3.09
ZFYVE28Q9HCC9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC34.28■■■■□ 3.08
ZFYVE28Q9HCC9 RARRES2P7-201ENST00000567349 469 ntBASIC34.25■■■■□ 3.07
ZFYVE28Q9HCC9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC34.24■■■■□ 3.07
ZFYVE28Q9HCC9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC34.23■■■■□ 3.07
ZFYVE28Q9HCC9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
ZFYVE28Q9HCC9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC34.21■■■■□ 3.07
ZFYVE28Q9HCC9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
ZFYVE28Q9HCC9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
ZFYVE28Q9HCC9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
ZFYVE28Q9HCC9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
ZFYVE28Q9HCC9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
ZFYVE28Q9HCC9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC34.12■■■■□ 3.05
ZFYVE28Q9HCC9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
ZFYVE28Q9HCC9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC34.06■■■■□ 3.04
ZFYVE28Q9HCC9 AC097358.2-201ENST00000607541 1159 ntBASIC34.02■■■■□ 3.04
ZFYVE28Q9HCC9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC34■■■■□ 3.03
ZFYVE28Q9HCC9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34■■■■□ 3.03
ZFYVE28Q9HCC9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.94■■■■□ 3.02
ZFYVE28Q9HCC9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.94■■■■□ 3.02
ZFYVE28Q9HCC9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.92■■■■□ 3.02
ZFYVE28Q9HCC9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
ZFYVE28Q9HCC9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.86■■■■□ 3.01
ZFYVE28Q9HCC9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
ZFYVE28Q9HCC9 AC136428.2-201ENST00000563187 214 ntBASIC33.85■■■■□ 3.01
ZFYVE28Q9HCC9 SETD8P1-201ENST00000623146 1180 ntBASIC33.85■■■■□ 3.01
ZFYVE28Q9HCC9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.81■■■■□ 3
ZFYVE28Q9HCC9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
ZFYVE28Q9HCC9 RPS2P35-201ENST00000443417 897 ntBASIC33.79■■■■□ 3
ZFYVE28Q9HCC9 SUZ12P1-203ENST00000578195 985 ntBASIC33.76■■■□□ 2.99
ZFYVE28Q9HCC9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
ZFYVE28Q9HCC9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.74■■■□□ 2.99
ZFYVE28Q9HCC9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
ZFYVE28Q9HCC9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.72■■■□□ 2.99
ZFYVE28Q9HCC9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
ZFYVE28Q9HCC9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC33.67■■■□□ 2.98
ZFYVE28Q9HCC9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.66■■■□□ 2.98
ZFYVE28Q9HCC9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.66■■■□□ 2.98
ZFYVE28Q9HCC9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.65■■■□□ 2.98
ZFYVE28Q9HCC9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
ZFYVE28Q9HCC9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
ZFYVE28Q9HCC9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.61■■■□□ 2.97
ZFYVE28Q9HCC9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
ZFYVE28Q9HCC9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
ZFYVE28Q9HCC9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
ZFYVE28Q9HCC9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.59■■■□□ 2.97
ZFYVE28Q9HCC9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ZFYVE28Q9HCC9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
ZFYVE28Q9HCC9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.54■■■□□ 2.96
ZFYVE28Q9HCC9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
ZFYVE28Q9HCC9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC33.51■■■□□ 2.95
ZFYVE28Q9HCC9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.51■■■□□ 2.95
ZFYVE28Q9HCC9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
ZFYVE28Q9HCC9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.47■■■□□ 2.95
ZFYVE28Q9HCC9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.47■■■□□ 2.95
ZFYVE28Q9HCC9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.45■■■□□ 2.95
ZFYVE28Q9HCC9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ZFYVE28Q9HCC9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC33.35■■■□□ 2.93
ZFYVE28Q9HCC9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ZFYVE28Q9HCC9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
ZFYVE28Q9HCC9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
ZFYVE28Q9HCC9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ZFYVE28Q9HCC9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
ZFYVE28Q9HCC9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
ZFYVE28Q9HCC9 CAHM-201ENST00000604200 896 ntBASIC33.22■■■□□ 2.91
ZFYVE28Q9HCC9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
ZFYVE28Q9HCC9 AL162393.1-201ENST00000437852 946 ntBASIC33.21■■■□□ 2.91
ZFYVE28Q9HCC9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC33.18■■■□□ 2.9
ZFYVE28Q9HCC9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.17■■■□□ 2.9
ZFYVE28Q9HCC9 AP006261.1-201ENST00000584783 668 ntBASIC33.16■■■□□ 2.9
ZFYVE28Q9HCC9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ZFYVE28Q9HCC9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
ZFYVE28Q9HCC9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ZFYVE28Q9HCC9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
ZFYVE28Q9HCC9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.11■■■□□ 2.89
ZFYVE28Q9HCC9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC33.11■■■□□ 2.89
ZFYVE28Q9HCC9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC33.11■■■□□ 2.89
ZFYVE28Q9HCC9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
ZFYVE28Q9HCC9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ZFYVE28Q9HCC9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ZFYVE28Q9HCC9 MVK-208ENST00000539696 608 ntTSL 5 BASIC33.08■■■□□ 2.89
ZFYVE28Q9HCC9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.07■■■□□ 2.88
ZFYVE28Q9HCC9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
ZFYVE28Q9HCC9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.07■■■□□ 2.88
ZFYVE28Q9HCC9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ZFYVE28Q9HCC9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ZFYVE28Q9HCC9 AL391121.1-201ENST00000607967 1349 ntBASIC33.02■■■□□ 2.88
ZFYVE28Q9HCC9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
ZFYVE28Q9HCC9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.99■■■□□ 2.87
ZFYVE28Q9HCC9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.96■■■□□ 2.87
ZFYVE28Q9HCC9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
ZFYVE28Q9HCC9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
ZFYVE28Q9HCC9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
ZFYVE28Q9HCC9 AC145285.7-201ENST00000614819 1539 ntBASIC32.94■■■□□ 2.86
ZFYVE28Q9HCC9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
ZFYVE28Q9HCC9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
ZFYVE28Q9HCC9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms