Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC7.81□□□□□ -1.16
LCE3DQ9BYE3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LCE3DQ9BYE3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
LCE3DQ9BYE3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
LCE3DQ9BYE3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC7.8□□□□□ -1.16
LCE3DQ9BYE3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LCE3DQ9BYE3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LCE3DQ9BYE3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LCE3DQ9BYE3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
LCE3DQ9BYE3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LCE3DQ9BYE3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LCE3DQ9BYE3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
LCE3DQ9BYE3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LCE3DQ9BYE3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LCE3DQ9BYE3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LCE3DQ9BYE3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LCE3DQ9BYE3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LCE3DQ9BYE3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LCE3DQ9BYE3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC7.75□□□□□ -1.17
LCE3DQ9BYE3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LCE3DQ9BYE3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LCE3DQ9BYE3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LCE3DQ9BYE3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC7.74□□□□□ -1.17
LCE3DQ9BYE3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LCE3DQ9BYE3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LCE3DQ9BYE3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LCE3DQ9BYE3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
LCE3DQ9BYE3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LCE3DQ9BYE3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LCE3DQ9BYE3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC7.72□□□□□ -1.17
LCE3DQ9BYE3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC7.72□□□□□ -1.17
LCE3DQ9BYE3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
LCE3DQ9BYE3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
LCE3DQ9BYE3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
LCE3DQ9BYE3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
LCE3DQ9BYE3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC7.7□□□□□ -1.18
LCE3DQ9BYE3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
LCE3DQ9BYE3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LCE3DQ9BYE3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LCE3DQ9BYE3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LCE3DQ9BYE3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LCE3DQ9BYE3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LCE3DQ9BYE3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LCE3DQ9BYE3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LCE3DQ9BYE3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LCE3DQ9BYE3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LCE3DQ9BYE3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LCE3DQ9BYE3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LCE3DQ9BYE3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LCE3DQ9BYE3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LCE3DQ9BYE3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
LCE3DQ9BYE3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LCE3DQ9BYE3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LCE3DQ9BYE3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LCE3DQ9BYE3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LCE3DQ9BYE3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LCE3DQ9BYE3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LCE3DQ9BYE3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LCE3DQ9BYE3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LCE3DQ9BYE3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
LCE3DQ9BYE3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LCE3DQ9BYE3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LCE3DQ9BYE3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LCE3DQ9BYE3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LCE3DQ9BYE3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LCE3DQ9BYE3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LCE3DQ9BYE3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC7.59□□□□□ -1.19
LCE3DQ9BYE3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
LCE3DQ9BYE3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LCE3DQ9BYE3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC7.59□□□□□ -1.2
LCE3DQ9BYE3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCE3DQ9BYE3 AC145285.7-201ENST00000614819 1539 ntBASIC7.58□□□□□ -1.2
LCE3DQ9BYE3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC7.58□□□□□ -1.2
LCE3DQ9BYE3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCE3DQ9BYE3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCE3DQ9BYE3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC7.57□□□□□ -1.2
LCE3DQ9BYE3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCE3DQ9BYE3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LCE3DQ9BYE3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCE3DQ9BYE3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LCE3DQ9BYE3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC7.56□□□□□ -1.2
LCE3DQ9BYE3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LCE3DQ9BYE3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LCE3DQ9BYE3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LCE3DQ9BYE3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LCE3DQ9BYE3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LCE3DQ9BYE3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LCE3DQ9BYE3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
LCE3DQ9BYE3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms