Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIGMAR1Q99720 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIGMAR1Q99720 AC135731.1-201ENST00000569415 2548 ntBASIC19.62■□□□□ 0.73
SIGMAR1Q99720 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIGMAR1Q99720 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIGMAR1Q99720 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIGMAR1Q99720 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SIGMAR1Q99720 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SIGMAR1Q99720 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIGMAR1Q99720 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIGMAR1Q99720 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIGMAR1Q99720 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIGMAR1Q99720 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIGMAR1Q99720 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIGMAR1Q99720 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIGMAR1Q99720 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.41■□□□□ 0.7
SIGMAR1Q99720 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIGMAR1Q99720 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIGMAR1Q99720 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIGMAR1Q99720 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIGMAR1Q99720 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIGMAR1Q99720 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.37■□□□□ 0.69
SIGMAR1Q99720 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.37■□□□□ 0.69
SIGMAR1Q99720 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIGMAR1Q99720 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIGMAR1Q99720 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SIGMAR1Q99720 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SIGMAR1Q99720 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SIGMAR1Q99720 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.32■□□□□ 0.68
SIGMAR1Q99720 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIGMAR1Q99720 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.31■□□□□ 0.68
SIGMAR1Q99720 HES6-203ENST00000409160 1600 ntTSL 2 BASIC19.31■□□□□ 0.68
SIGMAR1Q99720 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIGMAR1Q99720 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIGMAR1Q99720 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIGMAR1Q99720 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.28■□□□□ 0.68
SIGMAR1Q99720 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIGMAR1Q99720 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIGMAR1Q99720 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIGMAR1Q99720 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SIGMAR1Q99720 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIGMAR1Q99720 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIGMAR1Q99720 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIGMAR1Q99720 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIGMAR1Q99720 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIGMAR1Q99720 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIGMAR1Q99720 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIGMAR1Q99720 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SIGMAR1Q99720 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIGMAR1Q99720 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIGMAR1Q99720 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIGMAR1Q99720 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIGMAR1Q99720 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SIGMAR1Q99720 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIGMAR1Q99720 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIGMAR1Q99720 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIGMAR1Q99720 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIGMAR1Q99720 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIGMAR1Q99720 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.14■□□□□ 0.65
SIGMAR1Q99720 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.12■□□□□ 0.65
SIGMAR1Q99720 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.11■□□□□ 0.65
SIGMAR1Q99720 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIGMAR1Q99720 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIGMAR1Q99720 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIGMAR1Q99720 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIGMAR1Q99720 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIGMAR1Q99720 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIGMAR1Q99720 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIGMAR1Q99720 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIGMAR1Q99720 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIGMAR1Q99720 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SIGMAR1Q99720 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIGMAR1Q99720 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SIGMAR1Q99720 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC19.01■□□□□ 0.63
SIGMAR1Q99720 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIGMAR1Q99720 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIGMAR1Q99720 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SIGMAR1Q99720 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SIGMAR1Q99720 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SIGMAR1Q99720 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC18.95■□□□□ 0.62
SIGMAR1Q99720 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.94■□□□□ 0.62
SIGMAR1Q99720 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIGMAR1Q99720 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIGMAR1Q99720 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIGMAR1Q99720 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIGMAR1Q99720 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIGMAR1Q99720 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SIGMAR1Q99720 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SIGMAR1Q99720 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SIGMAR1Q99720 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIGMAR1Q99720 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIGMAR1Q99720 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SIGMAR1Q99720 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIGMAR1Q99720 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIGMAR1Q99720 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms