Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.94■■□□□ 1.9
SPENQ96T58 AL031258.1-201ENST00000623562 325 ntBASIC26.92■■□□□ 1.9
SPENQ96T58 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.92■■□□□ 1.9
SPENQ96T58 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPENQ96T58 AC136428.2-201ENST00000563187 214 ntBASIC26.91■■□□□ 1.9
SPENQ96T58 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.91■■□□□ 1.9
SPENQ96T58 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPENQ96T58 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.89■■□□□ 1.9
SPENQ96T58 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPENQ96T58 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SPENQ96T58 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
SPENQ96T58 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPENQ96T58 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SPENQ96T58 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
SPENQ96T58 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPENQ96T58 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPENQ96T58 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.78■■□□□ 1.88
SPENQ96T58 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPENQ96T58 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.76■■□□□ 1.88
SPENQ96T58 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
SPENQ96T58 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.76■■□□□ 1.87
SPENQ96T58 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
SPENQ96T58 RARRES2P7-201ENST00000567349 469 ntBASIC26.71■■□□□ 1.87
SPENQ96T58 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.71■■□□□ 1.87
SPENQ96T58 SUZ12P1-203ENST00000578195 985 ntBASIC26.67■■□□□ 1.86
SPENQ96T58 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SPENQ96T58 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
SPENQ96T58 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPENQ96T58 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SPENQ96T58 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SPENQ96T58 RPS2P35-201ENST00000443417 897 ntBASIC26.52■■□□□ 1.84
SPENQ96T58 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPENQ96T58 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.44■■□□□ 1.82
SPENQ96T58 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SPENQ96T58 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPENQ96T58 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPENQ96T58 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPENQ96T58 AC097358.2-201ENST00000607541 1159 ntBASIC26.4■■□□□ 1.82
SPENQ96T58 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPENQ96T58 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.38■■□□□ 1.81
SPENQ96T58 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPENQ96T58 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPENQ96T58 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SPENQ96T58 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.35■■□□□ 1.81
SPENQ96T58 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.35■■□□□ 1.81
SPENQ96T58 SETD8P1-201ENST00000623146 1180 ntBASIC26.34■■□□□ 1.81
SPENQ96T58 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPENQ96T58 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.31■■□□□ 1.8
SPENQ96T58 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.29■■□□□ 1.8
SPENQ96T58 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SPENQ96T58 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SPENQ96T58 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.26■■□□□ 1.79
SPENQ96T58 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SPENQ96T58 AL162393.1-201ENST00000437852 946 ntBASIC26.25■■□□□ 1.79
SPENQ96T58 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.25■■□□□ 1.79
SPENQ96T58 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPENQ96T58 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.24■■□□□ 1.79
SPENQ96T58 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPENQ96T58 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.24■■□□□ 1.79
SPENQ96T58 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.23■■□□□ 1.79
SPENQ96T58 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.2■■□□□ 1.78
SPENQ96T58 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
SPENQ96T58 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SPENQ96T58 AC145285.7-201ENST00000614819 1539 ntBASIC26.15■■□□□ 1.78
SPENQ96T58 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.15■■□□□ 1.78
SPENQ96T58 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.12■■□□□ 1.77
SPENQ96T58 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.08■■□□□ 1.76
SPENQ96T58 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPENQ96T58 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
SPENQ96T58 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26■■□□□ 1.75
SPENQ96T58 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SPENQ96T58 CAHM-201ENST00000604200 896 ntBASIC25.94■■□□□ 1.74
SPENQ96T58 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SPENQ96T58 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.92■■□□□ 1.74
SPENQ96T58 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SPENQ96T58 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.92■■□□□ 1.74
SPENQ96T58 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SPENQ96T58 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.89■■□□□ 1.73
SPENQ96T58 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPENQ96T58 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPENQ96T58 AL391121.1-201ENST00000607967 1349 ntBASIC25.86■■□□□ 1.73
SPENQ96T58 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPENQ96T58 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPENQ96T58 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SPENQ96T58 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPENQ96T58 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.84■■□□□ 1.73
SPENQ96T58 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPENQ96T58 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPENQ96T58 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPENQ96T58 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
SPENQ96T58 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.83■■□□□ 1.72
SPENQ96T58 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPENQ96T58 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.79■■□□□ 1.72
SPENQ96T58 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.78■■□□□ 1.72
SPENQ96T58 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SPENQ96T58 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPENQ96T58 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SPENQ96T58 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SPENQ96T58 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SPENQ96T58 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 668.5 ms