Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC35.31■■■■□ 3.24
CDCA5Q96FF9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC35.29■■■■□ 3.24
CDCA5Q96FF9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC35.24■■■■□ 3.23
CDCA5Q96FF9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC35.24■■■■□ 3.23
CDCA5Q96FF9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.22■■■■□ 3.23
CDCA5Q96FF9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.17■■■■□ 3.22
CDCA5Q96FF9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CDCA5Q96FF9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.16■■■■□ 3.22
CDCA5Q96FF9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC35.15■■■■□ 3.22
CDCA5Q96FF9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
CDCA5Q96FF9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CDCA5Q96FF9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.13■■■■□ 3.21
CDCA5Q96FF9 RARRES2P7-201ENST00000567349 469 ntBASIC35.13■■■■□ 3.21
CDCA5Q96FF9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC35.1■■■■□ 3.21
CDCA5Q96FF9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.07■■■■□ 3.21
CDCA5Q96FF9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CDCA5Q96FF9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34.97■■■■□ 3.19
CDCA5Q96FF9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDCA5Q96FF9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDCA5Q96FF9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.96■■■■□ 3.19
CDCA5Q96FF9 AC097358.2-201ENST00000607541 1159 ntBASIC34.9■■■■□ 3.18
CDCA5Q96FF9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDCA5Q96FF9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC34.82■■■■□ 3.16
CDCA5Q96FF9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDCA5Q96FF9 AC136428.2-201ENST00000563187 214 ntBASIC34.8■■■■□ 3.16
CDCA5Q96FF9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.78■■■■□ 3.16
CDCA5Q96FF9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.74■■■■□ 3.15
CDCA5Q96FF9 SETD8P1-201ENST00000623146 1180 ntBASIC34.74■■■■□ 3.15
CDCA5Q96FF9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CDCA5Q96FF9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.73■■■■□ 3.15
CDCA5Q96FF9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CDCA5Q96FF9 SUZ12P1-203ENST00000578195 985 ntBASIC34.7■■■■□ 3.15
CDCA5Q96FF9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDCA5Q96FF9 RPS2P35-201ENST00000443417 897 ntBASIC34.69■■■■□ 3.14
CDCA5Q96FF9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CDCA5Q96FF9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC34.68■■■■□ 3.14
CDCA5Q96FF9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
CDCA5Q96FF9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC34.61■■■■□ 3.13
CDCA5Q96FF9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.59■■■■□ 3.13
CDCA5Q96FF9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC34.57■■■■□ 3.12
CDCA5Q96FF9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CDCA5Q96FF9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDCA5Q96FF9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDCA5Q96FF9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.54■■■■□ 3.12
CDCA5Q96FF9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.53■■■■□ 3.12
CDCA5Q96FF9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.51■■■■□ 3.11
CDCA5Q96FF9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CDCA5Q96FF9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDCA5Q96FF9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.49■■■■□ 3.11
CDCA5Q96FF9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC34.49■■■■□ 3.11
CDCA5Q96FF9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
CDCA5Q96FF9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDCA5Q96FF9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.42■■■■□ 3.1
CDCA5Q96FF9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDCA5Q96FF9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CDCA5Q96FF9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
CDCA5Q96FF9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.39■■■■□ 3.1
CDCA5Q96FF9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.37■■■■□ 3.09
CDCA5Q96FF9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDCA5Q96FF9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.31■■■■□ 3.08
CDCA5Q96FF9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDCA5Q96FF9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.18■■■■□ 3.06
CDCA5Q96FF9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
CDCA5Q96FF9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
CDCA5Q96FF9 CAHM-201ENST00000604200 896 ntBASIC34.14■■■■□ 3.06
CDCA5Q96FF9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
CDCA5Q96FF9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.13■■■■□ 3.05
CDCA5Q96FF9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CDCA5Q96FF9 AL162393.1-201ENST00000437852 946 ntBASIC34.12■■■■□ 3.05
CDCA5Q96FF9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
CDCA5Q96FF9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
CDCA5Q96FF9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CDCA5Q96FF9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDCA5Q96FF9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.05■■■■□ 3.04
CDCA5Q96FF9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.04■■■■□ 3.04
CDCA5Q96FF9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC34.04■■■■□ 3.04
CDCA5Q96FF9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
CDCA5Q96FF9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
CDCA5Q96FF9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CDCA5Q96FF9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.99■■■■□ 3.03
CDCA5Q96FF9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.98■■■■□ 3.03
CDCA5Q96FF9 AP006261.1-201ENST00000584783 668 ntBASIC33.98■■■■□ 3.03
CDCA5Q96FF9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CDCA5Q96FF9 MVK-208ENST00000539696 608 ntTSL 5 BASIC33.94■■■■□ 3.02
CDCA5Q96FF9 AC145285.7-201ENST00000614819 1539 ntBASIC33.93■■■■□ 3.02
CDCA5Q96FF9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC33.92■■■■□ 3.02
CDCA5Q96FF9 AL391121.1-201ENST00000607967 1349 ntBASIC33.92■■■■□ 3.02
CDCA5Q96FF9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
CDCA5Q96FF9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.91■■■■□ 3.02
CDCA5Q96FF9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.91■■■■□ 3.02
CDCA5Q96FF9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.9■■■■□ 3.02
CDCA5Q96FF9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CDCA5Q96FF9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CDCA5Q96FF9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.85■■■■□ 3.01
CDCA5Q96FF9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
CDCA5Q96FF9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
CDCA5Q96FF9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC33.82■■■■□ 3
CDCA5Q96FF9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CDCA5Q96FF9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CDCA5Q96FF9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms