Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRNP40Q96DI7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNRNP40Q96DI7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.68■■□□□ 1.86
SNRNP40Q96DI7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.66■■□□□ 1.86
SNRNP40Q96DI7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.65■■□□□ 1.86
SNRNP40Q96DI7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SNRNP40Q96DI7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.62■■□□□ 1.85
SNRNP40Q96DI7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
SNRNP40Q96DI7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNRNP40Q96DI7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNRNP40Q96DI7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SNRNP40Q96DI7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.58■■□□□ 1.85
SNRNP40Q96DI7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.57■■□□□ 1.84
SNRNP40Q96DI7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.56■■□□□ 1.84
SNRNP40Q96DI7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNRNP40Q96DI7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
SNRNP40Q96DI7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.52■■□□□ 1.84
SNRNP40Q96DI7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
SNRNP40Q96DI7 RARRES2P7-201ENST00000567349 469 ntBASIC26.51■■□□□ 1.83
SNRNP40Q96DI7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP40Q96DI7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRNP40Q96DI7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.45■■□□□ 1.82
SNRNP40Q96DI7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNRNP40Q96DI7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRNP40Q96DI7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.39■■□□□ 1.82
SNRNP40Q96DI7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRNP40Q96DI7 AC097358.2-201ENST00000607541 1159 ntBASIC26.32■■□□□ 1.8
SNRNP40Q96DI7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNRNP40Q96DI7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRNP40Q96DI7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP40Q96DI7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.29■■□□□ 1.8
SNRNP40Q96DI7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.29■■□□□ 1.8
SNRNP40Q96DI7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.28■■□□□ 1.8
SNRNP40Q96DI7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SNRNP40Q96DI7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP40Q96DI7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
SNRNP40Q96DI7 SETD8P1-201ENST00000623146 1180 ntBASIC26.23■■□□□ 1.79
SNRNP40Q96DI7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNRNP40Q96DI7 AC136428.2-201ENST00000563187 214 ntBASIC26.21■■□□□ 1.79
SNRNP40Q96DI7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP40Q96DI7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP40Q96DI7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.17■■□□□ 1.78
SNRNP40Q96DI7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.16■■□□□ 1.78
SNRNP40Q96DI7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNRNP40Q96DI7 SUZ12P1-203ENST00000578195 985 ntBASIC26.12■■□□□ 1.77
SNRNP40Q96DI7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP40Q96DI7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.09■■□□□ 1.77
SNRNP40Q96DI7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.09■■□□□ 1.77
SNRNP40Q96DI7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP40Q96DI7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNRNP40Q96DI7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.07■■□□□ 1.76
SNRNP40Q96DI7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNRNP40Q96DI7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP40Q96DI7 RPS2P35-201ENST00000443417 897 ntBASIC26.05■■□□□ 1.76
SNRNP40Q96DI7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.05■■□□□ 1.76
SNRNP40Q96DI7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SNRNP40Q96DI7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNRNP40Q96DI7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.01■■□□□ 1.75
SNRNP40Q96DI7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNRNP40Q96DI7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SNRNP40Q96DI7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.99■■□□□ 1.75
SNRNP40Q96DI7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRNP40Q96DI7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SNRNP40Q96DI7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.96■■□□□ 1.75
SNRNP40Q96DI7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP40Q96DI7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.94■■□□□ 1.74
SNRNP40Q96DI7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.92■■□□□ 1.74
SNRNP40Q96DI7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP40Q96DI7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP40Q96DI7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SNRNP40Q96DI7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP40Q96DI7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
SNRNP40Q96DI7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.81■■□□□ 1.72
SNRNP40Q96DI7 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.81■■□□□ 1.72
SNRNP40Q96DI7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRNP40Q96DI7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRNP40Q96DI7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNRNP40Q96DI7 AC145285.7-201ENST00000614819 1539 ntBASIC25.78■■□□□ 1.72
SNRNP40Q96DI7 CAHM-201ENST00000604200 896 ntBASIC25.77■■□□□ 1.72
SNRNP40Q96DI7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNRNP40Q96DI7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP40Q96DI7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.72■■□□□ 1.71
SNRNP40Q96DI7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRNP40Q96DI7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SNRNP40Q96DI7 AL162393.1-201ENST00000437852 946 ntBASIC25.68■■□□□ 1.7
SNRNP40Q96DI7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRNP40Q96DI7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.67■■□□□ 1.7
SNRNP40Q96DI7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNRNP40Q96DI7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNRNP40Q96DI7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SNRNP40Q96DI7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRNP40Q96DI7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNRNP40Q96DI7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNRNP40Q96DI7 AP006261.1-201ENST00000584783 668 ntBASIC25.63■■□□□ 1.69
SNRNP40Q96DI7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.63■■□□□ 1.69
SNRNP40Q96DI7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRNP40Q96DI7 AL391121.1-201ENST00000607967 1349 ntBASIC25.63■■□□□ 1.69
SNRNP40Q96DI7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SNRNP40Q96DI7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP40Q96DI7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms