Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.99■■□□□ 1.91
SIMC1Q8NDZ2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SIMC1Q8NDZ2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
SIMC1Q8NDZ2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SIMC1Q8NDZ2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
SIMC1Q8NDZ2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SIMC1Q8NDZ2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.89■■□□□ 1.9
SIMC1Q8NDZ2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SIMC1Q8NDZ2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.89■■□□□ 1.9
SIMC1Q8NDZ2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.88■■□□□ 1.89
SIMC1Q8NDZ2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SIMC1Q8NDZ2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SIMC1Q8NDZ2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SIMC1Q8NDZ2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.88
SIMC1Q8NDZ2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SIMC1Q8NDZ2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SIMC1Q8NDZ2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SIMC1Q8NDZ2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.8■■□□□ 1.88
SIMC1Q8NDZ2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SIMC1Q8NDZ2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SIMC1Q8NDZ2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SIMC1Q8NDZ2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SIMC1Q8NDZ2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.72■■□□□ 1.87
SIMC1Q8NDZ2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SIMC1Q8NDZ2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.71■■□□□ 1.87
SIMC1Q8NDZ2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.7■■□□□ 1.86
SIMC1Q8NDZ2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIMC1Q8NDZ2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SIMC1Q8NDZ2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SIMC1Q8NDZ2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.66■■□□□ 1.86
SIMC1Q8NDZ2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.66■■□□□ 1.86
SIMC1Q8NDZ2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SIMC1Q8NDZ2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SIMC1Q8NDZ2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SIMC1Q8NDZ2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SIMC1Q8NDZ2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIMC1Q8NDZ2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SIMC1Q8NDZ2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIMC1Q8NDZ2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
SIMC1Q8NDZ2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SIMC1Q8NDZ2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SIMC1Q8NDZ2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SIMC1Q8NDZ2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SIMC1Q8NDZ2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SIMC1Q8NDZ2 DYNLL1-208ENST00000550178 581 ntBASIC26.54■■□□□ 1.84
SIMC1Q8NDZ2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SIMC1Q8NDZ2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.51■■□□□ 1.83
SIMC1Q8NDZ2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SIMC1Q8NDZ2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
SIMC1Q8NDZ2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.5■■□□□ 1.83
SIMC1Q8NDZ2 AP002365.1-201ENST00000603448 772 ntBASIC26.49■■□□□ 1.83
SIMC1Q8NDZ2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIMC1Q8NDZ2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SIMC1Q8NDZ2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.48■■□□□ 1.83
SIMC1Q8NDZ2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.48■■□□□ 1.83
SIMC1Q8NDZ2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
SIMC1Q8NDZ2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SIMC1Q8NDZ2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SIMC1Q8NDZ2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SIMC1Q8NDZ2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SIMC1Q8NDZ2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SIMC1Q8NDZ2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SIMC1Q8NDZ2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SIMC1Q8NDZ2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SIMC1Q8NDZ2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.4■■□□□ 1.82
SIMC1Q8NDZ2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SIMC1Q8NDZ2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
SIMC1Q8NDZ2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SIMC1Q8NDZ2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SIMC1Q8NDZ2 AL031258.1-201ENST00000623562 325 ntBASIC26.36■■□□□ 1.81
SIMC1Q8NDZ2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SIMC1Q8NDZ2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.33■■□□□ 1.81
SIMC1Q8NDZ2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
SIMC1Q8NDZ2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SIMC1Q8NDZ2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
SIMC1Q8NDZ2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SIMC1Q8NDZ2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SIMC1Q8NDZ2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.29■■□□□ 1.8
SIMC1Q8NDZ2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SIMC1Q8NDZ2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.28■■□□□ 1.8
SIMC1Q8NDZ2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SIMC1Q8NDZ2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SIMC1Q8NDZ2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.26■■□□□ 1.79
SIMC1Q8NDZ2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.24■■□□□ 1.79
SIMC1Q8NDZ2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SIMC1Q8NDZ2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.24■■□□□ 1.79
SIMC1Q8NDZ2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SIMC1Q8NDZ2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.23■■□□□ 1.79
SIMC1Q8NDZ2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SIMC1Q8NDZ2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SIMC1Q8NDZ2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SIMC1Q8NDZ2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.2■■□□□ 1.78
SIMC1Q8NDZ2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SIMC1Q8NDZ2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SIMC1Q8NDZ2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
SIMC1Q8NDZ2 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.16■■□□□ 1.78
SIMC1Q8NDZ2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
SIMC1Q8NDZ2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
SIMC1Q8NDZ2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SIMC1Q8NDZ2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms