Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
TRIML1Q8N9V2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRIML1Q8N9V2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
TRIML1Q8N9V2 AC015813.7-201ENST00000623294 581 ntBASIC32.19■■■□□ 2.74
TRIML1Q8N9V2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.15■■■□□ 2.74
TRIML1Q8N9V2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TRIML1Q8N9V2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.1■■■□□ 2.73
TRIML1Q8N9V2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TRIML1Q8N9V2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
TRIML1Q8N9V2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
TRIML1Q8N9V2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRIML1Q8N9V2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
TRIML1Q8N9V2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TRIML1Q8N9V2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.99■■■□□ 2.71
TRIML1Q8N9V2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIML1Q8N9V2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIML1Q8N9V2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIML1Q8N9V2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TRIML1Q8N9V2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIML1Q8N9V2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIML1Q8N9V2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.94■■■□□ 2.7
TRIML1Q8N9V2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIML1Q8N9V2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIML1Q8N9V2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIML1Q8N9V2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIML1Q8N9V2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.83■■■□□ 2.69
TRIML1Q8N9V2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TRIML1Q8N9V2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIML1Q8N9V2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIML1Q8N9V2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIML1Q8N9V2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIML1Q8N9V2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIML1Q8N9V2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
TRIML1Q8N9V2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
TRIML1Q8N9V2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIML1Q8N9V2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIML1Q8N9V2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TRIML1Q8N9V2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.67■■■□□ 2.66
TRIML1Q8N9V2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.66■■■□□ 2.66
TRIML1Q8N9V2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIML1Q8N9V2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIML1Q8N9V2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIML1Q8N9V2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIML1Q8N9V2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.63■■■□□ 2.65
TRIML1Q8N9V2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TRIML1Q8N9V2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIML1Q8N9V2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIML1Q8N9V2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.59■■■□□ 2.65
TRIML1Q8N9V2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIML1Q8N9V2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIML1Q8N9V2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIML1Q8N9V2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TRIML1Q8N9V2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIML1Q8N9V2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.51■■■□□ 2.63
TRIML1Q8N9V2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.51■■■□□ 2.63
TRIML1Q8N9V2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TRIML1Q8N9V2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIML1Q8N9V2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.47■■■□□ 2.63
TRIML1Q8N9V2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIML1Q8N9V2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIML1Q8N9V2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIML1Q8N9V2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
TRIML1Q8N9V2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.44■■■□□ 2.62
TRIML1Q8N9V2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.42■■■□□ 2.62
TRIML1Q8N9V2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIML1Q8N9V2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
TRIML1Q8N9V2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIML1Q8N9V2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIML1Q8N9V2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIML1Q8N9V2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.39■■■□□ 2.62
TRIML1Q8N9V2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
TRIML1Q8N9V2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
TRIML1Q8N9V2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIML1Q8N9V2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
TRIML1Q8N9V2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.36■■■□□ 2.61
TRIML1Q8N9V2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIML1Q8N9V2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIML1Q8N9V2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.34■■■□□ 2.61
TRIML1Q8N9V2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.33■■■□□ 2.61
TRIML1Q8N9V2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIML1Q8N9V2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIML1Q8N9V2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIML1Q8N9V2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIML1Q8N9V2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIML1Q8N9V2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.24■■■□□ 2.59
TRIML1Q8N9V2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIML1Q8N9V2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIML1Q8N9V2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIML1Q8N9V2 AC006077.2-201ENST00000623591 457 ntBASIC31.19■■■□□ 2.58
TRIML1Q8N9V2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.17■■■□□ 2.58
TRIML1Q8N9V2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
TRIML1Q8N9V2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
TRIML1Q8N9V2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.17■■■□□ 2.58
TRIML1Q8N9V2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
TRIML1Q8N9V2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.13■■■□□ 2.57
TRIML1Q8N9V2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
TRIML1Q8N9V2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TRIML1Q8N9V2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIML1Q8N9V2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIML1Q8N9V2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms