Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ARHGEF39Q8N4T4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ARHGEF39Q8N4T4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
ARHGEF39Q8N4T4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ARHGEF39Q8N4T4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ARHGEF39Q8N4T4 AC145285.7-201ENST00000614819 1539 ntBASIC27.46■■□□□ 1.99
ARHGEF39Q8N4T4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
ARHGEF39Q8N4T4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.43■■□□□ 1.98
ARHGEF39Q8N4T4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
ARHGEF39Q8N4T4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ARHGEF39Q8N4T4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ARHGEF39Q8N4T4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ARHGEF39Q8N4T4 DYNLL1-208ENST00000550178 581 ntBASIC27.41■■□□□ 1.98
ARHGEF39Q8N4T4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.39■■□□□ 1.98
ARHGEF39Q8N4T4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
ARHGEF39Q8N4T4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
ARHGEF39Q8N4T4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF39Q8N4T4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF39Q8N4T4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
ARHGEF39Q8N4T4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.3■■□□□ 1.96
ARHGEF39Q8N4T4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
ARHGEF39Q8N4T4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.29■■□□□ 1.96
ARHGEF39Q8N4T4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF39Q8N4T4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.28■■□□□ 1.96
ARHGEF39Q8N4T4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ARHGEF39Q8N4T4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
ARHGEF39Q8N4T4 AL031258.1-201ENST00000623562 325 ntBASIC27.26■■□□□ 1.95
ARHGEF39Q8N4T4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.25■■□□□ 1.95
ARHGEF39Q8N4T4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ARHGEF39Q8N4T4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.24■■□□□ 1.95
ARHGEF39Q8N4T4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ARHGEF39Q8N4T4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ARHGEF39Q8N4T4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ARHGEF39Q8N4T4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.21■■□□□ 1.95
ARHGEF39Q8N4T4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
ARHGEF39Q8N4T4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.17■■□□□ 1.94
ARHGEF39Q8N4T4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
ARHGEF39Q8N4T4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ARHGEF39Q8N4T4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.15■■□□□ 1.94
ARHGEF39Q8N4T4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ARHGEF39Q8N4T4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ARHGEF39Q8N4T4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
ARHGEF39Q8N4T4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ARHGEF39Q8N4T4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
ARHGEF39Q8N4T4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
ARHGEF39Q8N4T4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ARHGEF39Q8N4T4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.04■■□□□ 1.92
ARHGEF39Q8N4T4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ARHGEF39Q8N4T4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
ARHGEF39Q8N4T4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.99■■□□□ 1.91
ARHGEF39Q8N4T4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ARHGEF39Q8N4T4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
ARHGEF39Q8N4T4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.91■■□□□ 1.9
ARHGEF39Q8N4T4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.91■■□□□ 1.9
ARHGEF39Q8N4T4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ARHGEF39Q8N4T4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ARHGEF39Q8N4T4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
ARHGEF39Q8N4T4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ARHGEF39Q8N4T4 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.86■■□□□ 1.89
ARHGEF39Q8N4T4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ARHGEF39Q8N4T4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ARHGEF39Q8N4T4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.84■■□□□ 1.89
ARHGEF39Q8N4T4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF39Q8N4T4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
ARHGEF39Q8N4T4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF39Q8N4T4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.8■■□□□ 1.88
ARHGEF39Q8N4T4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.8■■□□□ 1.88
ARHGEF39Q8N4T4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF39Q8N4T4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
ARHGEF39Q8N4T4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF39Q8N4T4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF39Q8N4T4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ARHGEF39Q8N4T4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.72■■□□□ 1.87
ARHGEF39Q8N4T4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.72■■□□□ 1.87
ARHGEF39Q8N4T4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
ARHGEF39Q8N4T4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.69■■□□□ 1.86
ARHGEF39Q8N4T4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.69■■□□□ 1.86
ARHGEF39Q8N4T4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.68■■□□□ 1.86
ARHGEF39Q8N4T4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ARHGEF39Q8N4T4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
ARHGEF39Q8N4T4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.65■■□□□ 1.86
ARHGEF39Q8N4T4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ARHGEF39Q8N4T4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ARHGEF39Q8N4T4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.62■■□□□ 1.85
ARHGEF39Q8N4T4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.61■■□□□ 1.85
ARHGEF39Q8N4T4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
ARHGEF39Q8N4T4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ARHGEF39Q8N4T4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ARHGEF39Q8N4T4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ARHGEF39Q8N4T4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.55■■□□□ 1.84
ARHGEF39Q8N4T4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ARHGEF39Q8N4T4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ARHGEF39Q8N4T4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ARHGEF39Q8N4T4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.53■■□□□ 1.84
ARHGEF39Q8N4T4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ARHGEF39Q8N4T4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.52■■□□□ 1.84
ARHGEF39Q8N4T4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ARHGEF39Q8N4T4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ARHGEF39Q8N4T4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
ARHGEF39Q8N4T4 RARRES2P7-201ENST00000567349 469 ntBASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms