Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
NME8Q8N427 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
NME8Q8N427 AL031258.1-201ENST00000623562 325 ntBASIC32.19■■■□□ 2.74
NME8Q8N427 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
NME8Q8N427 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.13■■■□□ 2.73
NME8Q8N427 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
NME8Q8N427 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
NME8Q8N427 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NME8Q8N427 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
NME8Q8N427 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.09■■■□□ 2.73
NME8Q8N427 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.06■■■□□ 2.72
NME8Q8N427 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NME8Q8N427 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
NME8Q8N427 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
NME8Q8N427 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NME8Q8N427 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.91■■■□□ 2.7
NME8Q8N427 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.91■■■□□ 2.7
NME8Q8N427 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NME8Q8N427 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
NME8Q8N427 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.89■■■□□ 2.7
NME8Q8N427 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.89■■■□□ 2.69
NME8Q8N427 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NME8Q8N427 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.83■■■□□ 2.69
NME8Q8N427 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.81■■■□□ 2.68
NME8Q8N427 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.81■■■□□ 2.68
NME8Q8N427 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NME8Q8N427 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NME8Q8N427 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
NME8Q8N427 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.76■■■□□ 2.67
NME8Q8N427 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NME8Q8N427 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NME8Q8N427 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.66■■■□□ 2.66
NME8Q8N427 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NME8Q8N427 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NME8Q8N427 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
NME8Q8N427 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.61■■■□□ 2.65
NME8Q8N427 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
NME8Q8N427 RARRES2P7-201ENST00000567349 469 ntBASIC31.59■■■□□ 2.65
NME8Q8N427 AC145285.7-201ENST00000614819 1539 ntBASIC31.59■■■□□ 2.65
NME8Q8N427 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.56■■■□□ 2.64
NME8Q8N427 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.55■■■□□ 2.64
NME8Q8N427 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NME8Q8N427 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NME8Q8N427 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.47■■■□□ 2.63
NME8Q8N427 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.47■■■□□ 2.63
NME8Q8N427 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NME8Q8N427 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
NME8Q8N427 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
NME8Q8N427 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.45■■■□□ 2.63
NME8Q8N427 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
NME8Q8N427 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.43■■■□□ 2.62
NME8Q8N427 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NME8Q8N427 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.42■■■□□ 2.62
NME8Q8N427 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.42■■■□□ 2.62
NME8Q8N427 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
NME8Q8N427 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.39■■■□□ 2.62
NME8Q8N427 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
NME8Q8N427 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NME8Q8N427 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.38■■■□□ 2.61
NME8Q8N427 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.33■■■□□ 2.61
NME8Q8N427 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.33■■■□□ 2.61
NME8Q8N427 SETD8P1-201ENST00000623146 1180 ntBASIC31.32■■■□□ 2.6
NME8Q8N427 AC097358.2-201ENST00000607541 1159 ntBASIC31.31■■■□□ 2.6
NME8Q8N427 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
NME8Q8N427 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NME8Q8N427 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NME8Q8N427 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.26■■■□□ 2.59
NME8Q8N427 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NME8Q8N427 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.24■■■□□ 2.59
NME8Q8N427 AC136428.2-201ENST00000563187 214 ntBASIC31.22■■■□□ 2.59
NME8Q8N427 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NME8Q8N427 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NME8Q8N427 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
NME8Q8N427 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NME8Q8N427 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NME8Q8N427 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NME8Q8N427 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.17■■■□□ 2.58
NME8Q8N427 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NME8Q8N427 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.11■■■□□ 2.57
NME8Q8N427 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.1■■■□□ 2.57
NME8Q8N427 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.07■■■□□ 2.56
NME8Q8N427 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NME8Q8N427 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NME8Q8N427 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
NME8Q8N427 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NME8Q8N427 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.05■■■□□ 2.56
NME8Q8N427 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NME8Q8N427 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.04■■■□□ 2.56
NME8Q8N427 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NME8Q8N427 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NME8Q8N427 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NME8Q8N427 SUZ12P1-203ENST00000578195 985 ntBASIC31.01■■■□□ 2.55
NME8Q8N427 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NME8Q8N427 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NME8Q8N427 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NME8Q8N427 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NME8Q8N427 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.97■■■□□ 2.55
NME8Q8N427 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NME8Q8N427 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.93■■■□□ 2.54
NME8Q8N427 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms