Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RFX6Q8HWS3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RFX6Q8HWS3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.86■■■□□ 2.37
RFX6Q8HWS3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RFX6Q8HWS3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.81■■■□□ 2.36
RFX6Q8HWS3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RFX6Q8HWS3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RFX6Q8HWS3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
RFX6Q8HWS3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RFX6Q8HWS3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RFX6Q8HWS3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RFX6Q8HWS3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RFX6Q8HWS3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RFX6Q8HWS3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RFX6Q8HWS3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RFX6Q8HWS3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
RFX6Q8HWS3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RFX6Q8HWS3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
RFX6Q8HWS3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RFX6Q8HWS3 AC006077.2-201ENST00000623591 457 ntBASIC29.57■■■□□ 2.32
RFX6Q8HWS3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
RFX6Q8HWS3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RFX6Q8HWS3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RFX6Q8HWS3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RFX6Q8HWS3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
RFX6Q8HWS3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.49■■■□□ 2.31
RFX6Q8HWS3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RFX6Q8HWS3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.48■■■□□ 2.31
RFX6Q8HWS3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFX6Q8HWS3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.47■■■□□ 2.31
RFX6Q8HWS3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.46■■■□□ 2.31
RFX6Q8HWS3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.4■■■□□ 2.3
RFX6Q8HWS3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFX6Q8HWS3 ZNRF2P1-201ENST00000441407 443 ntBASIC29.37■■■□□ 2.29
RFX6Q8HWS3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
RFX6Q8HWS3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RFX6Q8HWS3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RFX6Q8HWS3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RFX6Q8HWS3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RFX6Q8HWS3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RFX6Q8HWS3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
RFX6Q8HWS3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RFX6Q8HWS3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.3■■■□□ 2.28
RFX6Q8HWS3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RFX6Q8HWS3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RFX6Q8HWS3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RFX6Q8HWS3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.26■■■□□ 2.27
RFX6Q8HWS3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.25■■■□□ 2.27
RFX6Q8HWS3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RFX6Q8HWS3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
RFX6Q8HWS3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.24■■■□□ 2.27
RFX6Q8HWS3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RFX6Q8HWS3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RFX6Q8HWS3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RFX6Q8HWS3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
RFX6Q8HWS3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFX6Q8HWS3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFX6Q8HWS3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
RFX6Q8HWS3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.15■■■□□ 2.26
RFX6Q8HWS3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.14■■■□□ 2.26
RFX6Q8HWS3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.13■■■□□ 2.25
RFX6Q8HWS3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RFX6Q8HWS3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RFX6Q8HWS3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RFX6Q8HWS3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RFX6Q8HWS3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.11■■■□□ 2.25
RFX6Q8HWS3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RFX6Q8HWS3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.1■■■□□ 2.25
RFX6Q8HWS3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
RFX6Q8HWS3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RFX6Q8HWS3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.06■■■□□ 2.24
RFX6Q8HWS3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RFX6Q8HWS3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.05■■■□□ 2.24
RFX6Q8HWS3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RFX6Q8HWS3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
RFX6Q8HWS3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RFX6Q8HWS3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
RFX6Q8HWS3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RFX6Q8HWS3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.99■■■□□ 2.23
RFX6Q8HWS3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.97■■■□□ 2.23
RFX6Q8HWS3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
RFX6Q8HWS3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RFX6Q8HWS3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
RFX6Q8HWS3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
RFX6Q8HWS3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
RFX6Q8HWS3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
RFX6Q8HWS3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
RFX6Q8HWS3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.93■■■□□ 2.22
RFX6Q8HWS3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
RFX6Q8HWS3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
RFX6Q8HWS3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
RFX6Q8HWS3 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.89■■■□□ 2.22
RFX6Q8HWS3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RFX6Q8HWS3 DYNLL1-208ENST00000550178 581 ntBASIC28.89■■■□□ 2.22
RFX6Q8HWS3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
RFX6Q8HWS3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RFX6Q8HWS3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
RFX6Q8HWS3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RFX6Q8HWS3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
RFX6Q8HWS3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms