Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
MRPL55Q7Z7F7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL55Q7Z7F7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL55Q7Z7F7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL55Q7Z7F7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MRPL55Q7Z7F7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL55Q7Z7F7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL55Q7Z7F7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
MRPL55Q7Z7F7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MRPL55Q7Z7F7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.23■□□□□ 0.51
MRPL55Q7Z7F7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MRPL55Q7Z7F7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL55Q7Z7F7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MRPL55Q7Z7F7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL55Q7Z7F7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL55Q7Z7F7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.2■□□□□ 0.5
MRPL55Q7Z7F7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL55Q7Z7F7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL55Q7Z7F7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MRPL55Q7Z7F7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL55Q7Z7F7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MRPL55Q7Z7F7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRPL55Q7Z7F7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRPL55Q7Z7F7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL55Q7Z7F7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL55Q7Z7F7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MRPL55Q7Z7F7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRPL55Q7Z7F7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.06■□□□□ 0.48
MRPL55Q7Z7F7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL55Q7Z7F7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL55Q7Z7F7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL55Q7Z7F7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
MRPL55Q7Z7F7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MRPL55Q7Z7F7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
MRPL55Q7Z7F7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
MRPL55Q7Z7F7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.99■□□□□ 0.47
MRPL55Q7Z7F7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL55Q7Z7F7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL55Q7Z7F7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL55Q7Z7F7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL55Q7Z7F7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL55Q7Z7F7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MRPL55Q7Z7F7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPL55Q7Z7F7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPL55Q7Z7F7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
MRPL55Q7Z7F7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPL55Q7Z7F7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MRPL55Q7Z7F7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MRPL55Q7Z7F7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17.89■□□□□ 0.45
MRPL55Q7Z7F7 AC006077.2-201ENST00000623591 457 ntBASIC17.89■□□□□ 0.45
MRPL55Q7Z7F7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPL55Q7Z7F7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
MRPL55Q7Z7F7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL55Q7Z7F7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.88■□□□□ 0.45
MRPL55Q7Z7F7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPL55Q7Z7F7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.87■□□□□ 0.45
MRPL55Q7Z7F7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRPL55Q7Z7F7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.86■□□□□ 0.45
MRPL55Q7Z7F7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRPL55Q7Z7F7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MRPL55Q7Z7F7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MRPL55Q7Z7F7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MRPL55Q7Z7F7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MRPL55Q7Z7F7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL55Q7Z7F7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL55Q7Z7F7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MRPL55Q7Z7F7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MRPL55Q7Z7F7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC17.82■□□□□ 0.44
MRPL55Q7Z7F7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPL55Q7Z7F7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MRPL55Q7Z7F7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPL55Q7Z7F7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPL55Q7Z7F7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPL55Q7Z7F7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPL55Q7Z7F7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL55Q7Z7F7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPL55Q7Z7F7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL55Q7Z7F7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL55Q7Z7F7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPL55Q7Z7F7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPL55Q7Z7F7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPL55Q7Z7F7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MRPL55Q7Z7F7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17.76■□□□□ 0.43
MRPL55Q7Z7F7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRPL55Q7Z7F7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.75■□□□□ 0.43
MRPL55Q7Z7F7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPL55Q7Z7F7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.74■□□□□ 0.43
MRPL55Q7Z7F7 ZNRF2P1-201ENST00000441407 443 ntBASIC17.74■□□□□ 0.43
MRPL55Q7Z7F7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPL55Q7Z7F7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPL55Q7Z7F7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.73■□□□□ 0.43
MRPL55Q7Z7F7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MRPL55Q7Z7F7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.71■□□□□ 0.43
MRPL55Q7Z7F7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPL55Q7Z7F7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MRPL55Q7Z7F7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL55Q7Z7F7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL55Q7Z7F7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPL55Q7Z7F7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC17.67■□□□□ 0.42
MRPL55Q7Z7F7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 6.7 ms