Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
USP50Q70EL3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC35.84■■■■□ 3.33
USP50Q70EL3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
USP50Q70EL3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.73■■■■□ 3.31
USP50Q70EL3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.72■■■■□ 3.31
USP50Q70EL3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
USP50Q70EL3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
USP50Q70EL3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC35.71■■■■□ 3.31
USP50Q70EL3 RARRES2P7-201ENST00000567349 469 ntBASIC35.67■■■■□ 3.3
USP50Q70EL3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.62■■■■□ 3.29
USP50Q70EL3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.57■■■■□ 3.28
USP50Q70EL3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.56■■■■□ 3.28
USP50Q70EL3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.55■■■■□ 3.28
USP50Q70EL3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
USP50Q70EL3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
USP50Q70EL3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.47■■■■□ 3.27
USP50Q70EL3 AC097358.2-201ENST00000607541 1159 ntBASIC35.45■■■■□ 3.27
USP50Q70EL3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.41■■■■□ 3.26
USP50Q70EL3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
USP50Q70EL3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.36■■■■□ 3.25
USP50Q70EL3 AC136428.2-201ENST00000563187 214 ntBASIC35.32■■■■□ 3.24
USP50Q70EL3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC35.29■■■■□ 3.24
USP50Q70EL3 RPS2P35-201ENST00000443417 897 ntBASIC35.28■■■■□ 3.24
USP50Q70EL3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
USP50Q70EL3 SETD8P1-201ENST00000623146 1180 ntBASIC35.26■■■■□ 3.24
USP50Q70EL3 SUZ12P1-203ENST00000578195 985 ntBASIC35.25■■■■□ 3.23
USP50Q70EL3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC35.23■■■■□ 3.23
USP50Q70EL3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC35.21■■■■□ 3.23
USP50Q70EL3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
USP50Q70EL3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
USP50Q70EL3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC35.2■■■■□ 3.23
USP50Q70EL3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
USP50Q70EL3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC35.2■■■■□ 3.23
USP50Q70EL3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
USP50Q70EL3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC35.17■■■■□ 3.22
USP50Q70EL3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC35.1■■■■□ 3.21
USP50Q70EL3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC35.09■■■■□ 3.21
USP50Q70EL3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
USP50Q70EL3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC35.05■■■■□ 3.2
USP50Q70EL3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
USP50Q70EL3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
USP50Q70EL3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
USP50Q70EL3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC35.01■■■■□ 3.2
USP50Q70EL3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC35■■■■□ 3.19
USP50Q70EL3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
USP50Q70EL3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
USP50Q70EL3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.98■■■■□ 3.19
USP50Q70EL3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC34.97■■■■□ 3.19
USP50Q70EL3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.95■■■■□ 3.19
USP50Q70EL3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
USP50Q70EL3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC34.91■■■■□ 3.18
USP50Q70EL3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.9■■■■□ 3.18
USP50Q70EL3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.87■■■■□ 3.17
USP50Q70EL3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.84■■■■□ 3.17
USP50Q70EL3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
USP50Q70EL3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
USP50Q70EL3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.82■■■■□ 3.16
USP50Q70EL3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
USP50Q70EL3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
USP50Q70EL3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
USP50Q70EL3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
USP50Q70EL3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.7■■■■□ 3.15
USP50Q70EL3 AL162393.1-201ENST00000437852 946 ntBASIC34.65■■■■□ 3.14
USP50Q70EL3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
USP50Q70EL3 CAHM-201ENST00000604200 896 ntBASIC34.63■■■■□ 3.13
USP50Q70EL3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.62■■■■□ 3.13
USP50Q70EL3 AP006261.1-201ENST00000584783 668 ntBASIC34.6■■■■□ 3.13
USP50Q70EL3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
USP50Q70EL3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.58■■■■□ 3.13
USP50Q70EL3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
USP50Q70EL3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
USP50Q70EL3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
USP50Q70EL3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.53■■■■□ 3.12
USP50Q70EL3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
USP50Q70EL3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
USP50Q70EL3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.52■■■■□ 3.12
USP50Q70EL3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.51■■■■□ 3.12
USP50Q70EL3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
USP50Q70EL3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
USP50Q70EL3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.45■■■■□ 3.11
USP50Q70EL3 AL391121.1-201ENST00000607967 1349 ntBASIC34.41■■■■□ 3.1
USP50Q70EL3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
USP50Q70EL3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
USP50Q70EL3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
USP50Q70EL3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
USP50Q70EL3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
USP50Q70EL3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.38■■■■□ 3.09
USP50Q70EL3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
USP50Q70EL3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
USP50Q70EL3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
USP50Q70EL3 MVK-208ENST00000539696 608 ntTSL 5 BASIC34.35■■■■□ 3.09
USP50Q70EL3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
USP50Q70EL3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
USP50Q70EL3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.31■■■■□ 3.08
USP50Q70EL3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC34.3■■■■□ 3.08
USP50Q70EL3 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.3■■■■□ 3.08
USP50Q70EL3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
USP50Q70EL3 MIR7108-201ENST00000614319 87 ntBASIC34.29■■■■□ 3.08
USP50Q70EL3 ABHD17AP4-201ENST00000411545 909 ntBASIC34.28■■■■□ 3.08
USP50Q70EL3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms