Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NIPAL1Q6NVV3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NIPAL1Q6NVV3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.47■■□□□ 1.99
NIPAL1Q6NVV3 AC145285.7-201ENST00000614819 1539 ntBASIC27.46■■□□□ 1.99
NIPAL1Q6NVV3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
NIPAL1Q6NVV3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
NIPAL1Q6NVV3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.43■■□□□ 1.98
NIPAL1Q6NVV3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NIPAL1Q6NVV3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NIPAL1Q6NVV3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NIPAL1Q6NVV3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NIPAL1Q6NVV3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.35■■□□□ 1.97
NIPAL1Q6NVV3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.34■■□□□ 1.97
NIPAL1Q6NVV3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
NIPAL1Q6NVV3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NIPAL1Q6NVV3 AP002365.1-201ENST00000603448 772 ntBASIC27.31■■□□□ 1.96
NIPAL1Q6NVV3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
NIPAL1Q6NVV3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
NIPAL1Q6NVV3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
NIPAL1Q6NVV3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NIPAL1Q6NVV3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NIPAL1Q6NVV3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
NIPAL1Q6NVV3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NIPAL1Q6NVV3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
NIPAL1Q6NVV3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
NIPAL1Q6NVV3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NIPAL1Q6NVV3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NIPAL1Q6NVV3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
NIPAL1Q6NVV3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NIPAL1Q6NVV3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NIPAL1Q6NVV3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
NIPAL1Q6NVV3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.17■■□□□ 1.94
NIPAL1Q6NVV3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
NIPAL1Q6NVV3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NIPAL1Q6NVV3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
NIPAL1Q6NVV3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
NIPAL1Q6NVV3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
NIPAL1Q6NVV3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.13■■□□□ 1.93
NIPAL1Q6NVV3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
NIPAL1Q6NVV3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.11■■□□□ 1.93
NIPAL1Q6NVV3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NIPAL1Q6NVV3 DYNLL1-208ENST00000550178 581 ntBASIC27.1■■□□□ 1.93
NIPAL1Q6NVV3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.1■■□□□ 1.93
NIPAL1Q6NVV3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
NIPAL1Q6NVV3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
NIPAL1Q6NVV3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.08■■□□□ 1.93
NIPAL1Q6NVV3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.08■■□□□ 1.93
NIPAL1Q6NVV3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.08■■□□□ 1.93
NIPAL1Q6NVV3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.08■■□□□ 1.93
NIPAL1Q6NVV3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NIPAL1Q6NVV3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NIPAL1Q6NVV3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.01■■□□□ 1.91
NIPAL1Q6NVV3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NIPAL1Q6NVV3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.99■■□□□ 1.91
NIPAL1Q6NVV3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
NIPAL1Q6NVV3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NIPAL1Q6NVV3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NIPAL1Q6NVV3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
NIPAL1Q6NVV3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
NIPAL1Q6NVV3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.97■■□□□ 1.91
NIPAL1Q6NVV3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.96■■□□□ 1.91
NIPAL1Q6NVV3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NIPAL1Q6NVV3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
NIPAL1Q6NVV3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.92■■□□□ 1.9
NIPAL1Q6NVV3 AL031258.1-201ENST00000623562 325 ntBASIC26.92■■□□□ 1.9
NIPAL1Q6NVV3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NIPAL1Q6NVV3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.9■■□□□ 1.9
NIPAL1Q6NVV3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NIPAL1Q6NVV3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
NIPAL1Q6NVV3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NIPAL1Q6NVV3 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.87■■□□□ 1.89
NIPAL1Q6NVV3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
NIPAL1Q6NVV3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NIPAL1Q6NVV3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NIPAL1Q6NVV3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NIPAL1Q6NVV3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.79■■□□□ 1.88
NIPAL1Q6NVV3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.79■■□□□ 1.88
NIPAL1Q6NVV3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
NIPAL1Q6NVV3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NIPAL1Q6NVV3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
NIPAL1Q6NVV3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NIPAL1Q6NVV3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.74■■□□□ 1.87
NIPAL1Q6NVV3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NIPAL1Q6NVV3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NIPAL1Q6NVV3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NIPAL1Q6NVV3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NIPAL1Q6NVV3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.67■■□□□ 1.86
NIPAL1Q6NVV3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
NIPAL1Q6NVV3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.66■■□□□ 1.86
NIPAL1Q6NVV3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NIPAL1Q6NVV3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.65■■□□□ 1.86
NIPAL1Q6NVV3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.65■■□□□ 1.86
NIPAL1Q6NVV3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NIPAL1Q6NVV3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NIPAL1Q6NVV3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NIPAL1Q6NVV3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NIPAL1Q6NVV3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
NIPAL1Q6NVV3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NIPAL1Q6NVV3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
NIPAL1Q6NVV3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms