Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC01556Q5JQF7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01556Q5JQF7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01556Q5JQF7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC01556Q5JQF7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01556Q5JQF7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01556Q5JQF7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01556Q5JQF7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LINC01556Q5JQF7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LINC01556Q5JQF7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LINC01556Q5JQF7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01556Q5JQF7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01556Q5JQF7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01556Q5JQF7 AP002365.1-201ENST00000603448 772 ntBASIC19.53■□□□□ 0.72
LINC01556Q5JQF7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01556Q5JQF7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01556Q5JQF7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01556Q5JQF7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01556Q5JQF7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.5■□□□□ 0.71
LINC01556Q5JQF7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01556Q5JQF7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LINC01556Q5JQF7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC01556Q5JQF7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC01556Q5JQF7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01556Q5JQF7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
LINC01556Q5JQF7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01556Q5JQF7 DYNLL1-208ENST00000550178 581 ntBASIC19.43■□□□□ 0.7
LINC01556Q5JQF7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01556Q5JQF7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LINC01556Q5JQF7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01556Q5JQF7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01556Q5JQF7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC01556Q5JQF7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01556Q5JQF7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01556Q5JQF7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01556Q5JQF7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01556Q5JQF7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01556Q5JQF7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01556Q5JQF7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01556Q5JQF7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01556Q5JQF7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01556Q5JQF7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01556Q5JQF7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC01556Q5JQF7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC01556Q5JQF7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01556Q5JQF7 AL031258.1-201ENST00000623562 325 ntBASIC19.28■□□□□ 0.68
LINC01556Q5JQF7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01556Q5JQF7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01556Q5JQF7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01556Q5JQF7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LINC01556Q5JQF7 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC01556Q5JQF7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01556Q5JQF7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01556Q5JQF7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01556Q5JQF7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01556Q5JQF7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LINC01556Q5JQF7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01556Q5JQF7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01556Q5JQF7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01556Q5JQF7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01556Q5JQF7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.16■□□□□ 0.66
LINC01556Q5JQF7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
LINC01556Q5JQF7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01556Q5JQF7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC01556Q5JQF7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01556Q5JQF7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.11■□□□□ 0.65
LINC01556Q5JQF7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01556Q5JQF7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01556Q5JQF7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
LINC01556Q5JQF7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01556Q5JQF7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01556Q5JQF7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.09■□□□□ 0.65
LINC01556Q5JQF7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC01556Q5JQF7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01556Q5JQF7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01556Q5JQF7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01556Q5JQF7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01556Q5JQF7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
LINC01556Q5JQF7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01556Q5JQF7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01556Q5JQF7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LINC01556Q5JQF7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LINC01556Q5JQF7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01556Q5JQF7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01556Q5JQF7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC01556Q5JQF7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01556Q5JQF7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01556Q5JQF7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01556Q5JQF7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01556Q5JQF7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
LINC01556Q5JQF7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01556Q5JQF7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.96■□□□□ 0.63
LINC01556Q5JQF7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.96■□□□□ 0.63
LINC01556Q5JQF7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01556Q5JQF7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01556Q5JQF7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01556Q5JQF7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01556Q5JQF7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01556Q5JQF7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01556Q5JQF7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms