Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC11.82□□□□□ -0.526e-7■■■■□ 21.7
HNRNPUQ00839 HOXC10-205ENST00000515593 526 ntTSL 411.02□□□□□ -0.653e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.093e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.073e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC15.02■□□□□ -03e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-204ENST00000439966 2972 ntTSL 1 (best)14.9□□□□□ -0.023e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.413e-6■■■■□ 21.4
HNRNPUQ00839 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC16.66■□□□□ 0.263e-7■■■■□ 21.3
HNRNPUQ00839 ZEB2-221ENST00000479735 543 ntTSL 425.85■■□□□ 1.731e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.911e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-230ENST00000629955 1435 ntTSL 518.79■□□□□ 0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-231ENST00000630572 468 ntTSL 518.05■□□□□ 0.481e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.451e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-237ENST00000636732 5073 ntTSL 517.5■□□□□ 0.391e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)16.34■□□□□ 0.211e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-235ENST00000636445 2947 ntTSL 514.9□□□□□ -0.021e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC14.66□□□□□ -0.061e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC14.15□□□□□ -0.141e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC13.61□□□□□ -0.231e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-209ENST00000435831 554 ntTSL 413.56□□□□□ -0.241e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-220ENST00000476394 601 ntTSL 313.4□□□□□ -0.261e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC13.36□□□□□ -0.271e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.351e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC12.64□□□□□ -0.391e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC12.34□□□□□ -0.431e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-207ENST00000431672 709 ntTSL 411.68□□□□□ -0.541e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC11.67□□□□□ -0.541e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-226ENST00000625161 3061 nt11.33□□□□□ -0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC11.31□□□□□ -0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-211ENST00000444559 577 ntTSL 411.03□□□□□ -0.641e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)10.99□□□□□ -0.651e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-216ENST00000465308 1071 ntTSL 510.73□□□□□ -0.691e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-208ENST00000434448 583 ntTSL 510.73□□□□□ -0.691e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-240ENST00000637267 2677 ntTSL 510.33□□□□□ -0.761e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.32□□□□□ -0.761e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.791e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-222ENST00000484313 845 ntTSL 1 (best)9.99□□□□□ -0.811e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-212ENST00000453352 581 ntTSL 39.88□□□□□ -0.831e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-203ENST00000409211 587 ntTSL 48.33□□□□□ -1.081e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.09□□□□□ -1.271e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)5.47□□□□□ -1.531e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-213ENST00000461784 751 ntTSL 35.16□□□□□ -1.581e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-242ENST00000637591 101 ntTSL 53.77□□□□□ -1.811e-7■■■■□ 21.2
HNRNPUQ00839 PVT1-201ENST00000504719 754 ntTSL 232.16■■■□□ 2.741e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.76■■■□□ 2.681e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.4■■■□□ 2.621e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-204ENST00000517525 392 ntTSL 331.06■■■□□ 2.561e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-218ENST00000523328 343 ntTSL 1 (best)27.39■■□□□ 1.981e-6■■■■□ 21.2
HNRNPUQ00839 PAH-212ENST00000551337 675 ntTSL 324.11■■□□□ 1.451e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-220ENST00000524165 458 ntTSL 220■□□□□ 0.791e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-215ENST00000522963 568 ntTSL 415.69■□□□□ 0.11e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-216ENST00000523068 844 ntTSL 5 BASIC13.59□□□□□ -0.231e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-207ENST00000518528 624 ntTSL 310.36□□□□□ -0.751e-6■■■■□ 21.2
HNRNPUQ00839 PAH-213ENST00000551988 584 ntTSL 39.82□□□□□ -0.841e-6■■■■□ 21.2
HNRNPUQ00839 PAH-207ENST00000549111 1252 ntTSL 1 (best)9.34□□□□□ -0.911e-6■■■■□ 21.2
HNRNPUQ00839 PAH-210ENST00000550978 652 ntTSL 25.53□□□□□ -1.521e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-205ENST00000517790 599 ntTSL 25.47□□□□□ -1.531e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)29.99■■■□□ 2.392e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.93■■□□□ 1.582e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.312e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.632e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-211ENST00000589528 441 ntTSL 218.28■□□□□ 0.522e-6■■■■□ 21.2
HNRNPUQ00839 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)20.48■□□□□ 0.871e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.051e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-204ENST00000558355 572 ntTSL 214□□□□□ -0.171e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-203ENST00000557938 574 ntTSL 412.66□□□□□ -0.381e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.691e-6■■■■□ 21.1
HNRNPUQ00839 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.183e-7■■■■□ 21
HNRNPUQ00839 ANKS6-205ENST00000471846 1103 ntTSL 227.75■■■□□ 2.033e-7■■■■□ 21
HNRNPUQ00839 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.493e-7■■■■□ 21
HNRNPUQ00839 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC22.29■■□□□ 1.163e-7■■■■□ 21
HNRNPUQ00839 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC19.31■□□□□ 0.683e-7■■■■□ 21
HNRNPUQ00839 ANKS6-207ENST00000634393 2284 ntTSL 517.72■□□□□ 0.433e-7■■■■□ 21
HNRNPUQ00839 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC33.24■■■□□ 2.911e-6■■■■□ 21
HNRNPUQ00839 GCLC-203ENST00000504525 1011 ntTSL 328.04■■■□□ 2.081e-6■■■■□ 21
HNRNPUQ00839 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC22.47■■□□□ 1.191e-6■■■■□ 21
HNRNPUQ00839 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-6■■■■□ 21
HNRNPUQ00839 GCLC-208ENST00000513939 519 ntTSL 211.7□□□□□ -0.541e-6■■■■□ 21
HNRNPUQ00839 GCLC-205ENST00000505294 847 ntTSL 37.37□□□□□ -1.231e-6■■■■□ 21
HNRNPUQ00839 GCLC-211ENST00000514933 542 ntTSL 56.82□□□□□ -1.321e-6■■■■□ 21
HNRNPUQ00839 FSCN1-202ENST00000405801 550 ntTSL 423.77■■□□□ 1.45e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.375e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-204ENST00000447103 713 ntTSL 423.34■■□□□ 1.335e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-203ENST00000444748 580 ntTSL 321.84■■□□□ 1.095e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-210ENST00000496823 1138 ntTSL 317.95■□□□□ 0.462e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC16.23■□□□□ 0.192e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-209ENST00000480458 342 ntTSL 510.88□□□□□ -0.672e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-207ENST00000470319 526 ntTSL 45.89□□□□□ -1.472e-7■■■■□ 20.7
HNRNPUQ00839 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.122e-6■■■■□ 20.6
HNRNPUQ00839 AHDC1-205ENST00000490295 511 ntTSL 521.77■■□□□ 1.082e-6■■■■□ 20.6
HNRNPUQ00839 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.942e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.14■■□□□ 1.941e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-221ENST00000556600 751 ntTSL 325.74■■□□□ 1.712e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-219ENST00000555987 557 ntTSL 425.74■■□□□ 1.712e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-205ENST00000577411 562 ntTSL 523.75■■□□□ 1.391e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-211ENST00000580050 476 ntTSL 423.75■■□□□ 1.391e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-220ENST00000584634 588 ntTSL 423.09■■□□□ 1.291e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.23■□□□□ 0.991e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.782e-6■■■■□ 20.6
Retrieved 100 of 2,288 protein–RNA pairs in 118.7 ms