Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC11.82□□□□□ -0.526e-7■■■■□ 21.7
HNRNPUQ00839 HOXC10-205ENST00000515593 526 ntTSL 411.02□□□□□ -0.653e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.093e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.073e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC15.02■□□□□ -03e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-204ENST00000439966 2972 ntTSL 1 (best)14.9□□□□□ -0.023e-6■■■■□ 21.4
HNRNPUQ00839 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.413e-6■■■■□ 21.4
HNRNPUQ00839 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC16.66■□□□□ 0.263e-7■■■■□ 21.3
HNRNPUQ00839 ZEB2-221ENST00000479735 543 ntTSL 425.85■■□□□ 1.731e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.911e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-230ENST00000629955 1435 ntTSL 518.79■□□□□ 0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-231ENST00000630572 468 ntTSL 518.05■□□□□ 0.481e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.451e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-237ENST00000636732 5073 ntTSL 517.5■□□□□ 0.391e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)16.34■□□□□ 0.211e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-235ENST00000636445 2947 ntTSL 514.9□□□□□ -0.021e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC14.66□□□□□ -0.061e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC14.15□□□□□ -0.141e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC13.61□□□□□ -0.231e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-209ENST00000435831 554 ntTSL 413.56□□□□□ -0.241e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-220ENST00000476394 601 ntTSL 313.4□□□□□ -0.261e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC13.36□□□□□ -0.271e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.351e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC12.64□□□□□ -0.391e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC12.34□□□□□ -0.431e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-207ENST00000431672 709 ntTSL 411.68□□□□□ -0.541e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC11.67□□□□□ -0.541e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-226ENST00000625161 3061 nt11.33□□□□□ -0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC11.31□□□□□ -0.61e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-211ENST00000444559 577 ntTSL 411.03□□□□□ -0.641e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)10.99□□□□□ -0.651e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-216ENST00000465308 1071 ntTSL 510.73□□□□□ -0.691e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-208ENST00000434448 583 ntTSL 510.73□□□□□ -0.691e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-240ENST00000637267 2677 ntTSL 510.33□□□□□ -0.761e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.32□□□□□ -0.761e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.791e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-222ENST00000484313 845 ntTSL 1 (best)9.99□□□□□ -0.811e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-212ENST00000453352 581 ntTSL 39.88□□□□□ -0.831e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-203ENST00000409211 587 ntTSL 48.33□□□□□ -1.081e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.09□□□□□ -1.271e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)5.47□□□□□ -1.531e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-213ENST00000461784 751 ntTSL 35.16□□□□□ -1.581e-7■■■■□ 21.2
HNRNPUQ00839 ZEB2-242ENST00000637591 101 ntTSL 53.77□□□□□ -1.811e-7■■■■□ 21.2
HNRNPUQ00839 PVT1-201ENST00000504719 754 ntTSL 232.16■■■□□ 2.741e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.76■■■□□ 2.681e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.4■■■□□ 2.621e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-204ENST00000517525 392 ntTSL 331.06■■■□□ 2.561e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-218ENST00000523328 343 ntTSL 1 (best)27.39■■□□□ 1.981e-6■■■■□ 21.2
HNRNPUQ00839 PAH-212ENST00000551337 675 ntTSL 324.11■■□□□ 1.451e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-220ENST00000524165 458 ntTSL 220■□□□□ 0.791e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-215ENST00000522963 568 ntTSL 415.69■□□□□ 0.11e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-216ENST00000523068 844 ntTSL 5 BASIC13.59□□□□□ -0.231e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-207ENST00000518528 624 ntTSL 310.36□□□□□ -0.751e-6■■■■□ 21.2
HNRNPUQ00839 PAH-213ENST00000551988 584 ntTSL 39.82□□□□□ -0.841e-6■■■■□ 21.2
HNRNPUQ00839 PAH-207ENST00000549111 1252 ntTSL 1 (best)9.34□□□□□ -0.911e-6■■■■□ 21.2
HNRNPUQ00839 PAH-210ENST00000550978 652 ntTSL 25.53□□□□□ -1.521e-6■■■■□ 21.2
HNRNPUQ00839 PVT1-205ENST00000517790 599 ntTSL 25.47□□□□□ -1.531e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)29.99■■■□□ 2.392e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.93■■□□□ 1.582e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.312e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.632e-6■■■■□ 21.2
HNRNPUQ00839 ACTN4-211ENST00000589528 441 ntTSL 218.28■□□□□ 0.522e-6■■■■□ 21.2
HNRNPUQ00839 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)20.48■□□□□ 0.871e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.051e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-204ENST00000558355 572 ntTSL 214□□□□□ -0.171e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-203ENST00000557938 574 ntTSL 412.66□□□□□ -0.381e-6■■■■□ 21.1
HNRNPUQ00839 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.691e-6■■■■□ 21.1
HNRNPUQ00839 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.183e-7■■■■□ 21
HNRNPUQ00839 ANKS6-205ENST00000471846 1103 ntTSL 227.75■■■□□ 2.033e-7■■■■□ 21
HNRNPUQ00839 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.493e-7■■■■□ 21
HNRNPUQ00839 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC22.29■■□□□ 1.163e-7■■■■□ 21
HNRNPUQ00839 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC19.31■□□□□ 0.683e-7■■■■□ 21
HNRNPUQ00839 ANKS6-207ENST00000634393 2284 ntTSL 517.72■□□□□ 0.433e-7■■■■□ 21
HNRNPUQ00839 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC33.24■■■□□ 2.911e-6■■■■□ 21
HNRNPUQ00839 GCLC-203ENST00000504525 1011 ntTSL 328.04■■■□□ 2.081e-6■■■■□ 21
HNRNPUQ00839 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC22.47■■□□□ 1.191e-6■■■■□ 21
HNRNPUQ00839 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-6■■■■□ 21
HNRNPUQ00839 GCLC-208ENST00000513939 519 ntTSL 211.7□□□□□ -0.541e-6■■■■□ 21
HNRNPUQ00839 GCLC-205ENST00000505294 847 ntTSL 37.37□□□□□ -1.231e-6■■■■□ 21
HNRNPUQ00839 GCLC-211ENST00000514933 542 ntTSL 56.82□□□□□ -1.321e-6■■■■□ 21
HNRNPUQ00839 FSCN1-202ENST00000405801 550 ntTSL 423.77■■□□□ 1.45e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.375e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-204ENST00000447103 713 ntTSL 423.34■■□□□ 1.335e-7■■■■□ 20.7
HNRNPUQ00839 FSCN1-203ENST00000444748 580 ntTSL 321.84■■□□□ 1.095e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-210ENST00000496823 1138 ntTSL 317.95■□□□□ 0.462e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC16.23■□□□□ 0.192e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-209ENST00000480458 342 ntTSL 510.88□□□□□ -0.672e-7■■■■□ 20.7
HNRNPUQ00839 BCL6-207ENST00000470319 526 ntTSL 45.89□□□□□ -1.472e-7■■■■□ 20.7
HNRNPUQ00839 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.122e-6■■■■□ 20.6
HNRNPUQ00839 AHDC1-205ENST00000490295 511 ntTSL 521.77■■□□□ 1.082e-6■■■■□ 20.6
HNRNPUQ00839 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.942e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.14■■□□□ 1.941e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-221ENST00000556600 751 ntTSL 325.74■■□□□ 1.712e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-219ENST00000555987 557 ntTSL 425.74■■□□□ 1.712e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-205ENST00000577411 562 ntTSL 523.75■■□□□ 1.391e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-211ENST00000580050 476 ntTSL 423.75■■□□□ 1.391e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-220ENST00000584634 588 ntTSL 423.09■■□□□ 1.291e-6■■■■□ 20.6
HNRNPUQ00839 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.23■□□□□ 0.991e-6■■■■□ 20.6
HNRNPUQ00839 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.782e-6■■■■□ 20.6
Retrieved 100 of 2,288 protein–RNA pairs in 274.1 ms