RNA–Protein interactions for RNA: ENST00000625161.1

ZEB2-226, Transcript of zinc finger E-box binding homeobox 2, humanhuman

Gene ZEB2, Length 3,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-226ENST00000625161 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
ZEB2-226ENST00000625161 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
ZEB2-226ENST00000625161 ZCCHC6Q5VYS8 1495 aaKnown RBP14.4□□□□□ -0.1
ZEB2-226ENST00000625161 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
ZEB2-226ENST00000625161 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
ZEB2-226ENST00000625161 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
ZEB2-226ENST00000625161 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
ZEB2-226ENST00000625161 HRCP23327 699 aa13.97□□□□□ -0.17
ZEB2-226ENST00000625161 ABCC9O60706 1549 aa13.79□□□□□ -0.2
ZEB2-226ENST00000625161 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
ZEB2-226ENST00000625161 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
ZEB2-226ENST00000625161 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
ZEB2-226ENST00000625161 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
ZEB2-226ENST00000625161 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
ZEB2-226ENST00000625161 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
ZEB2-226ENST00000625161 NACADO15069 1562 aa13.49□□□□□ -0.25
ZEB2-226ENST00000625161 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
ZEB2-226ENST00000625161 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
ZEB2-226ENST00000625161 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
ZEB2-226ENST00000625161 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
ZEB2-226ENST00000625161 MYT1Q01538 1121 aa13.28□□□□□ -0.28
ZEB2-226ENST00000625161 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
ZEB2-226ENST00000625161 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
ZEB2-226ENST00000625161 WIZO95785 1651 aa13.23□□□□□ -0.29
ZEB2-226ENST00000625161 BAZ1AQ9NRL2 1556 aaPredicted RBP13.14□□□□□ -0.31
ZEB2-226ENST00000625161 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
ZEB2-226ENST00000625161 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
ZEB2-226ENST00000625161 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
ZEB2-226ENST00000625161 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
ZEB2-226ENST00000625161 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
ZEB2-226ENST00000625161 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
ZEB2-226ENST00000625161 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
ZEB2-226ENST00000625161 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
ZEB2-226ENST00000625161 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
ZEB2-226ENST00000625161 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
ZEB2-226ENST00000625161 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
ZEB2-226ENST00000625161 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
ZEB2-226ENST00000625161 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
ZEB2-226ENST00000625161 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZEB2-226ENST00000625161 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
ZEB2-226ENST00000625161 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
ZEB2-226ENST00000625161 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
ZEB2-226ENST00000625161 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
ZEB2-226ENST00000625161 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
ZEB2-226ENST00000625161 CENPBP07199 599 aaPredicted RBP12.73□□□□□ -0.37
ZEB2-226ENST00000625161 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
ZEB2-226ENST00000625161 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
ZEB2-226ENST00000625161 SOGA1O94964 1423 aa12.64□□□□□ -0.39
ZEB2-226ENST00000625161 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
ZEB2-226ENST00000625161 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
ZEB2-226ENST00000625161 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
ZEB2-226ENST00000625161 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
ZEB2-226ENST00000625161 EEA1Q15075 1411 aa12.54□□□□□ -0.4
ZEB2-226ENST00000625161 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
ZEB2-226ENST00000625161 TTBK1Q5TCY1 1321 aaPredicted RBP12.51□□□□□ -0.41
ZEB2-226ENST00000625161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
ZEB2-226ENST00000625161 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
ZEB2-226ENST00000625161 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
ZEB2-226ENST00000625161 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
ZEB2-226ENST00000625161 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
ZEB2-226ENST00000625161 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
ZEB2-226ENST00000625161 KIF21BO75037 1637 aa12.48□□□□□ -0.41
ZEB2-226ENST00000625161 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
ZEB2-226ENST00000625161 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
ZEB2-226ENST00000625161 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
ZEB2-226ENST00000625161 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
ZEB2-226ENST00000625161 YTHDC1Q96MU7 727 aaKnown RBP12.46□□□□□ -0.41
ZEB2-226ENST00000625161 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
ZEB2-226ENST00000625161 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
ZEB2-226ENST00000625161 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
ZEB2-226ENST00000625161 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
ZEB2-226ENST00000625161 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
ZEB2-226ENST00000625161 CUX1P39880 1505 aa12.34□□□□□ -0.43
ZEB2-226ENST00000625161 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.44
ZEB2-226ENST00000625161 CLIP1P30622 1438 aa12.31□□□□□ -0.44
ZEB2-226ENST00000625161 CFTRP13569 1480 aa12.3□□□□□ -0.44
ZEB2-226ENST00000625161 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
ZEB2-226ENST00000625161 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
ZEB2-226ENST00000625161 MIER1Q8N108 512 aa12.27□□□□□ -0.45
ZEB2-226ENST00000625161 VPS8Q8N3P4 1428 aa12.25□□□□□ -0.45
ZEB2-226ENST00000625161 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
ZEB2-226ENST00000625161 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
ZEB2-226ENST00000625161 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
ZEB2-226ENST00000625161 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
ZEB2-226ENST00000625161 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
ZEB2-226ENST00000625161 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
ZEB2-226ENST00000625161 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
ZEB2-226ENST00000625161 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
ZEB2-226ENST00000625161 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
ZEB2-226ENST00000625161 CUX2O14529 1486 aa12.12□□□□□ -0.47
ZEB2-226ENST00000625161 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
ZEB2-226ENST00000625161 APLP2Q06481 763 aa12.09□□□□□ -0.47
ZEB2-226ENST00000625161 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
ZEB2-226ENST00000625161 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
ZEB2-226ENST00000625161 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
ZEB2-226ENST00000625161 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
ZEB2-226ENST00000625161 NESP48681 1621 aa12.06□□□□□ -0.48
ZEB2-226ENST00000625161 IGF1RP08069 1367 aa12.04□□□□□ -0.48
ZEB2-226ENST00000625161 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
ZEB2-226ENST00000625161 TOPBP1Q92547 1522 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms