Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.183e-19■■■■■ 82.9
LSM11P83369 TP53BP1-205ENST00000413546 3143 ntTSL 57.18□□□□□ -1.263e-19■■■■■ 82.9
LSM11P83369 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.97□□□□□ -1.293e-19■■■■■ 82.9
LSM11P83369 SNX13-204ENST00000444712 2018 ntTSL 514.49□□□□□ -0.097e-19■■■■■ 81
LSM11P83369 SNX13-208ENST00000482558 1139 ntTSL 213.64□□□□□ -0.237e-19■■■■■ 81
LSM11P83369 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC10.48□□□□□ -0.737e-19■■■■■ 81
LSM11P83369 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.037e-19■■■■■ 81
LSM11P83369 SNX13-201ENST00000409076 3818 ntTSL 28.03□□□□□ -1.127e-19■■■■■ 81
LSM11P83369 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.94□□□□□ -1.467e-19■■■■■ 81
LSM11P83369 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.19■□□□□ 0.341e-25■■■■■ 79.2
LSM11P83369 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.21e-25■■■■■ 79.2
LSM11P83369 KANSL1-223ENST00000639150 1815 ntTSL 515.3■□□□□ 0.041e-25■■■■■ 79.2
LSM11P83369 KANSL1-203ENST00000571698 2276 ntTSL 514.32□□□□□ -0.121e-25■■■■■ 79.2
LSM11P83369 KANSL1-229ENST00000639531 2731 ntTSL 511.87□□□□□ -0.511e-25■■■■■ 79.2
LSM11P83369 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC10.79□□□□□ -0.681e-25■■■■■ 79.2
LSM11P83369 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.711e-25■■■■■ 79.2
LSM11P83369 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.851e-25■■■■■ 79.2
LSM11P83369 KANSL1-217ENST00000638269 3365 ntTSL 59.61□□□□□ -0.871e-25■■■■■ 79.2
LSM11P83369 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.041e-25■■■■■ 79.2
LSM11P83369 KANSL1-226ENST00000639375 3392 ntTSL 57.42□□□□□ -1.221e-25■■■■■ 79.2
LSM11P83369 KANSL1-231ENST00000639853 1425 ntTSL 56.97□□□□□ -1.291e-25■■■■■ 79.2
LSM11P83369 KANSL1-213ENST00000576248 452 ntTSL 35.28□□□□□ -1.561e-25■■■■■ 79.2
LSM11P83369 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.382e-18■■■■■ 79.1
LSM11P83369 ZMYM4-203ENST00000457946 6003 ntTSL 54.75□□□□□ -1.652e-18■■■■■ 79.1
LSM11P83369 USP28-208ENST00000540438 3015 ntTSL 216.21■□□□□ 0.186e-18■■■■■ 77.1
LSM11P83369 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.44□□□□□ -0.16e-18■■■■■ 77.1
LSM11P83369 USP28-204ENST00000537642 732 ntTSL 312.87□□□□□ -0.356e-18■■■■■ 77.1
LSM11P83369 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-18■■■■■ 77.1
LSM11P83369 USP28-202ENST00000535607 683 ntTSL 310.11□□□□□ -0.796e-18■■■■■ 77.1
LSM11P83369 USP28-207ENST00000538475 1081 ntTSL 39.69□□□□□ -0.866e-18■■■■■ 77.1
LSM11P83369 USP28-215ENST00000545608 733 ntTSL 58.97□□□□□ -0.976e-18■■■■■ 77.1
LSM11P83369 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.35□□□□□ -1.076e-18■■■■■ 77.1
LSM11P83369 USP28-210ENST00000542033 852 ntTSL 27.59□□□□□ -1.196e-18■■■■■ 77.1
LSM11P83369 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.17■□□□□ 0.826e-12■■■■■ 77.1
LSM11P83369 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.396e-12■■■■■ 77.1
LSM11P83369 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.336e-12■■■■■ 77.1
LSM11P83369 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.43□□□□□ -0.266e-12■■■■■ 77.1
LSM11P83369 USP48-202ENST00000374730 570 ntTSL 410.55□□□□□ -0.726e-12■■■■■ 77.1
LSM11P83369 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.82□□□□□ -13e-17■■■■■ 73.5
LSM11P83369 LINC00243-202ENST00000419357 264 ntTSL 38.01□□□□□ -1.133e-17■■■■■ 73.5
LSM11P83369 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.42e-14■■■■■ 72.7
LSM11P83369 BIRC6-209ENST00000471232 4226 ntTSL 25.82□□□□□ -1.482e-14■■■■■ 72.7
LSM11P83369 EZH2-210ENST00000498186 1876 ntTSL 222.72■■□□□ 1.232e-13■■■■■ 71.6
LSM11P83369 EZH2-207ENST00000483012 1491 ntTSL 222.58■■□□□ 1.22e-13■■■■■ 71.6
LSM11P83369 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.52■■□□□ 1.192e-13■■■■■ 71.6
LSM11P83369 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.042e-13■■■■■ 71.6
LSM11P83369 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.62e-13■■■■■ 71.6
LSM11P83369 EZH2-209ENST00000492143 3641 ntTSL 215.74■□□□□ 0.112e-13■■■■■ 71.6
LSM11P83369 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.572e-13■■■■■ 71.6
LSM11P83369 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC8.85□□□□□ -0.992e-13■■■■■ 71.6
LSM11P83369 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.262e-13■■■■■ 71.6
LSM11P83369 HIST1H3J-202ENST00000479986 522 ntTSL 219.2■□□□□ 0.663e-14■■■■■ 70.7
LSM11P83369 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.092e-10■■■■■ 69.8
LSM11P83369 PHC3-201ENST00000465896 538 ntTSL 510.65□□□□□ -0.79e-11■■■■■ 68.8
LSM11P83369 PHC3-210ENST00000484931 657 ntTSL 59.95□□□□□ -0.829e-11■■■■■ 68.8
LSM11P83369 PHC3-207ENST00000479467 987 ntTSL 29□□□□□ -0.979e-11■■■■■ 68.8
LSM11P83369 PHC3-206ENST00000475729 772 ntTSL 58.19□□□□□ -1.19e-11■■■■■ 68.8
LSM11P83369 PHC3-202ENST00000466189 580 ntTSL 38.19□□□□□ -1.19e-11■■■■■ 68.8
LSM11P83369 PHC3-204ENST00000472330 609 ntTSL 36.34□□□□□ -1.399e-11■■■■■ 68.8
LSM11P83369 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.96□□□□□ -1.469e-11■■■■■ 68.8
LSM11P83369 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.53□□□□□ -1.529e-11■■■■■ 68.8
LSM11P83369 PHC3-205ENST00000474275 2427 ntTSL 25.05□□□□□ -1.69e-11■■■■■ 68.8
LSM11P83369 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.869e-11■■■■■ 68.8
LSM11P83369 WWC2-207ENST00000508614 604 ntTSL 315.15■□□□□ 0.024e-10■■■■■ 68.4
LSM11P83369 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.354e-10■■■■■ 68.4
LSM11P83369 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC11.14□□□□□ -0.634e-10■■■■■ 68.4
LSM11P83369 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC9.77□□□□□ -0.854e-10■■■■■ 68.4
LSM11P83369 LMBR1-209ENST00000434453 2229 ntTSL 523.52■■□□□ 1.361e-11■■■■■ 67.4
LSM11P83369 LMBR1-214ENST00000461469 560 ntTSL 320.45■□□□□ 0.861e-11■■■■■ 67.4
LSM11P83369 LMBR1-211ENST00000444719 762 ntTSL 319.38■□□□□ 0.691e-11■■■■■ 67.4
LSM11P83369 LMBR1-213ENST00000454132 2922 ntTSL 218.75■□□□□ 0.591e-11■■■■■ 67.4
LSM11P83369 LMBR1-217ENST00000485985 644 ntTSL 218.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-205ENST00000430278 523 ntTSL 418.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-207ENST00000433968 578 ntTSL 418.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-210ENST00000434503 930 ntTSL 518.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-203ENST00000414218 451 ntTSL 517.84■□□□□ 0.451e-11■■■■■ 67.4
LSM11P83369 LMBR1-219ENST00000498034 478 ntTSL 317.61■□□□□ 0.411e-11■■■■■ 67.4
LSM11P83369 LMBR1-208ENST00000434278 678 ntTSL 517.51■□□□□ 0.391e-11■■■■■ 67.4
LSM11P83369 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.44□□□□□ -0.11e-11■■■■■ 67.4
LSM11P83369 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.461e-11■■■■■ 67.4
LSM11P83369 LMBR1-204ENST00000415428 3457 ntTSL 1 (best)5.5□□□□□ -1.531e-11■■■■■ 67.4
LSM11P83369 MTMR10-203ENST00000564787 631 ntTSL 516.07■□□□□ 0.163e-15■■■■■ 65.6
LSM11P83369 MTMR10-204ENST00000565728 1623 ntTSL 514.84□□□□□ -0.033e-15■■■■■ 65.6
LSM11P83369 MTMR10-207ENST00000567567 2833 ntTSL 210.36□□□□□ -0.753e-15■■■■■ 65.6
LSM11P83369 MTMR10-202ENST00000563714 2216 ntTSL 2 BASIC10.34□□□□□ -0.753e-15■■■■■ 65.6
LSM11P83369 MTMR10-209ENST00000568604 5679 ntTSL 1 (best)8.6□□□□□ -1.033e-15■■■■■ 65.6
LSM11P83369 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.093e-15■■■■■ 65.6
LSM11P83369 IGF2BP3-213ENST00000491719 800 ntTSL 517.98■□□□□ 0.472e-8■■■■■ 65.4
LSM11P83369 IGF2BP3-210ENST00000476938 500 ntTSL 215.68■□□□□ 0.12e-8■■■■■ 65.4
LSM11P83369 IGF2BP3-206ENST00000468005 2948 ntTSL 513.48□□□□□ -0.252e-8■■■■■ 65.4
LSM11P83369 TBC1D5-224ENST00000473612 330 ntTSL 211.78□□□□□ -0.522e-8■■■■■ 64.1
LSM11P83369 TBC1D5-225ENST00000480435 560 ntTSL 59.99□□□□□ -0.812e-8■■■■■ 64.1
LSM11P83369 TBC1D5-212ENST00000433533 471 ntTSL 38.86□□□□□ -0.992e-8■■■■■ 64.1
LSM11P83369 TBC1D5-230ENST00000507877 578 ntTSL 48.46□□□□□ -1.062e-8■■■■■ 64.1
LSM11P83369 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.27□□□□□ -1.082e-8■■■■■ 64.1
LSM11P83369 OXR1-203ENST00000435082 2023 ntTSL 219.03■□□□□ 0.641e-13■■■■■ 64.1
LSM11P83369 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.461e-13■■■■■ 64.1
LSM11P83369 OXR1-212ENST00000521592 993 ntTSL 5 BASIC10.34□□□□□ -0.751e-13■■■■■ 64.1
LSM11P83369 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.17□□□□□ -1.261e-13■■■■■ 64.1
LSM11P83369 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.85□□□□□ -1.471e-13■■■■■ 64.1
Retrieved 100 of 11,495 protein–RNA pairs in 313.8 ms