RNA–Protein interactions for RNA: ENST00000475729.5

PHC3-206, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-206ENST00000475729 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
PHC3-206ENST00000475729 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
PHC3-206ENST00000475729 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
PHC3-206ENST00000475729 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
PHC3-206ENST00000475729 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
PHC3-206ENST00000475729 FOXD1Q16676 465 aa14.86□□□□□ -0.03
PHC3-206ENST00000475729 ADRA2BP18089 450 aa14.36□□□□□ -0.11
PHC3-206ENST00000475729 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
PHC3-206ENST00000475729 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
PHC3-206ENST00000475729 MSH5O43196 834 aa13.58□□□□□ -0.24
PHC3-206ENST00000475729 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
PHC3-206ENST00000475729 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PHC3-206ENST00000475729 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
PHC3-206ENST00000475729 KCNA4P22459 653 aa12.92□□□□□ -0.34
PHC3-206ENST00000475729 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
PHC3-206ENST00000475729 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
PHC3-206ENST00000475729 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
PHC3-206ENST00000475729 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
PHC3-206ENST00000475729 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
PHC3-206ENST00000475729 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
PHC3-206ENST00000475729 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
PHC3-206ENST00000475729 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
PHC3-206ENST00000475729 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
PHC3-206ENST00000475729 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
PHC3-206ENST00000475729 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
PHC3-206ENST00000475729 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
PHC3-206ENST00000475729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■□□□ 11.4
PHC3-206ENST00000475729 ZBTB22O15209 634 aa11.91□□□□□ -0.5
PHC3-206ENST00000475729 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
PHC3-206ENST00000475729 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
PHC3-206ENST00000475729 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
PHC3-206ENST00000475729 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
PHC3-206ENST00000475729 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
PHC3-206ENST00000475729 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
PHC3-206ENST00000475729 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
PHC3-206ENST00000475729 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
PHC3-206ENST00000475729 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
PHC3-206ENST00000475729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
PHC3-206ENST00000475729 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
PHC3-206ENST00000475729 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
PHC3-206ENST00000475729 CAPN15O75808 1086 aa11.4□□□□□ -0.58
PHC3-206ENST00000475729 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
PHC3-206ENST00000475729 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
PHC3-206ENST00000475729 APLP2Q06481 763 aa11.29□□□□□ -0.6
PHC3-206ENST00000475729 ABCB7O75027 752 aa11.24□□□□□ -0.61
PHC3-206ENST00000475729 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
PHC3-206ENST00000475729 DSG3P32926 999 aa11.15□□□□□ -0.62
PHC3-206ENST00000475729 POLA2Q14181 598 aa11.13□□□□□ -0.63
PHC3-206ENST00000475729 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
PHC3-206ENST00000475729 FBLN2P98095 1184 aa10.84□□□□□ -0.67
PHC3-206ENST00000475729 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
PHC3-206ENST00000475729 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
PHC3-206ENST00000475729 FKBP8Q14318 412 aa10.7□□□□□ -0.7
PHC3-206ENST00000475729 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
PHC3-206ENST00000475729 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
PHC3-206ENST00000475729 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
PHC3-206ENST00000475729 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
PHC3-206ENST00000475729 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
PHC3-206ENST00000475729 RBM42Q9BTD8 480 aaKnown RBP10.52□□□□□ -0.73
PHC3-206ENST00000475729 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
PHC3-206ENST00000475729 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
PHC3-206ENST00000475729 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
PHC3-206ENST00000475729 REM2Q8IYK8 340 aaPredicted RBP10.4□□□□□ -0.74
PHC3-206ENST00000475729 PROM2Q8N271 834 aa10.36□□□□□ -0.75
PHC3-206ENST00000475729 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
PHC3-206ENST00000475729 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
PHC3-206ENST00000475729 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
PHC3-206ENST00000475729 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
PHC3-206ENST00000475729 STAG3Q9UJ98 1225 aa10.18□□□□□ -0.78
PHC3-206ENST00000475729 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
PHC3-206ENST00000475729 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
PHC3-206ENST00000475729 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
PHC3-206ENST00000475729 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
PHC3-206ENST00000475729 MIER1Q8N108 512 aa10.11□□□□□ -0.79
PHC3-206ENST00000475729 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
PHC3-206ENST00000475729 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
PHC3-206ENST00000475729 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
PHC3-206ENST00000475729 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
PHC3-206ENST00000475729 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
PHC3-206ENST00000475729 IFNLR1Q8IU57 520 aaPredicted RBP10.02□□□□□ -0.81
PHC3-206ENST00000475729 KLHL34Q8N239 644 aa10□□□□□ -0.81
PHC3-206ENST00000475729 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
PHC3-206ENST00000475729 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
PHC3-206ENST00000475729 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
PHC3-206ENST00000475729 POTEHQ6S545 545 aa9.87□□□□□ -0.83
PHC3-206ENST00000475729 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
PHC3-206ENST00000475729 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
PHC3-206ENST00000475729 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PHC3-206ENST00000475729 NUBP1P53384 320 aa9.82□□□□□ -0.84
PHC3-206ENST00000475729 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
PHC3-206ENST00000475729 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
PHC3-206ENST00000475729 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
PHC3-206ENST00000475729 HAX1O00165 279 aa9.77□□□□□ -0.85
PHC3-206ENST00000475729 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
PHC3-206ENST00000475729 EVX2Q03828 476 aa9.76□□□□□ -0.85
PHC3-206ENST00000475729 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
PHC3-206ENST00000475729 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
PHC3-206ENST00000475729 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
PHC3-206ENST00000475729 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
PHC3-206ENST00000475729 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms