RNA–Protein interactions for RNA: ENST00000472330.5

PHC3-204, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-204ENST00000472330 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
PHC3-204ENST00000472330 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
PHC3-204ENST00000472330 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
PHC3-204ENST00000472330 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
PHC3-204ENST00000472330 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
PHC3-204ENST00000472330 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
PHC3-204ENST00000472330 ADRA2BP18089 450 aa11.17□□□□□ -0.62
PHC3-204ENST00000472330 KCNA4P22459 653 aa11.13□□□□□ -0.63
PHC3-204ENST00000472330 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
PHC3-204ENST00000472330 FOXD1Q16676 465 aa10.9□□□□□ -0.66
PHC3-204ENST00000472330 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
PHC3-204ENST00000472330 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
PHC3-204ENST00000472330 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
PHC3-204ENST00000472330 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
PHC3-204ENST00000472330 PIAS4Q8N2W9 510 aaPredicted RBP10.47□□□□□ -0.73
PHC3-204ENST00000472330 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
PHC3-204ENST00000472330 ZBTB22O15209 634 aa10.22□□□□□ -0.77
PHC3-204ENST00000472330 CNKSR2Q8WXI2 1034 aa10.22□□□□□ -0.77
PHC3-204ENST00000472330 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
PHC3-204ENST00000472330 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
PHC3-204ENST00000472330 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
PHC3-204ENST00000472330 AMER1Q5JTC6 1135 aaPredicted RBP10.03□□□□□ -0.8
PHC3-204ENST00000472330 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
PHC3-204ENST00000472330 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
PHC3-204ENST00000472330 RNF216Q9NWF9 866 aaPredicted RBP9.85□□□□□ -0.83
PHC3-204ENST00000472330 MSH5O43196 834 aa9.84□□□□□ -0.83
PHC3-204ENST00000472330 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
PHC3-204ENST00000472330 POTEDQ86YR6 584 aa9.75□□□□□ -0.85
PHC3-204ENST00000472330 FKBP8Q14318 412 aa9.7□□□□□ -0.86
PHC3-204ENST00000472330 ATXN8OSP0DMR3 200 aa9.69□□□□□ -0.86
PHC3-204ENST00000472330 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
PHC3-204ENST00000472330 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
PHC3-204ENST00000472330 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
PHC3-204ENST00000472330 DMRT2Q9Y5R5 561 aa9.56□□□□□ -0.88
PHC3-204ENST00000472330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.28□□□□□ -0.92
PHC3-204ENST00000472330 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
PHC3-204ENST00000472330 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
PHC3-204ENST00000472330 ATF5Q9Y2D1 282 aaPredicted RBP9.26□□□□□ -0.93
PHC3-204ENST00000472330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.934e-8■■□□□ 12.6
PHC3-204ENST00000472330 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
PHC3-204ENST00000472330 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
PHC3-204ENST00000472330 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
PHC3-204ENST00000472330 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
PHC3-204ENST00000472330 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
PHC3-204ENST00000472330 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
PHC3-204ENST00000472330 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
PHC3-204ENST00000472330 DCAF8L2P0C7V8 631 aa9.07□□□□□ -0.96
PHC3-204ENST00000472330 BCANQ96GW7 911 aa9.06□□□□□ -0.96
PHC3-204ENST00000472330 APLP2Q06481 763 aa9.04□□□□□ -0.96
PHC3-204ENST00000472330 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
PHC3-204ENST00000472330 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
PHC3-204ENST00000472330 PROM2Q8N271 834 aa8.96□□□□□ -0.98
PHC3-204ENST00000472330 IFNLR1Q8IU57 520 aaPredicted RBP8.94□□□□□ -0.98
PHC3-204ENST00000472330 PRKCSHP14314 528 aaPredicted RBP8.92□□□□□ -0.98
PHC3-204ENST00000472330 FBLN2P98095 1184 aa8.92□□□□□ -0.98
PHC3-204ENST00000472330 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
PHC3-204ENST00000472330 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
PHC3-204ENST00000472330 PKD2Q13563 968 aa8.89□□□□□ -0.99
PHC3-204ENST00000472330 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
PHC3-204ENST00000472330 BBXQ8WY36 941 aaPredicted RBP8.83□□□□□ -1
PHC3-204ENST00000472330 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
PHC3-204ENST00000472330 KLHL34Q8N239 644 aa8.79□□□□□ -1
PHC3-204ENST00000472330 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
PHC3-204ENST00000472330 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
PHC3-204ENST00000472330 ECM2O94769 699 aaPredicted RBP8.76□□□□□ -1.01
PHC3-204ENST00000472330 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
PHC3-204ENST00000472330 KDM2AQ9Y2K7 1162 aa8.76□□□□□ -1.01
PHC3-204ENST00000472330 TRHP20396 242 aaPredicted RBP8.74□□□□□ -1.01
PHC3-204ENST00000472330 POLA2Q14181 598 aa8.73□□□□□ -1.01
PHC3-204ENST00000472330 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
PHC3-204ENST00000472330 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
PHC3-204ENST00000472330 ZBTB12Q9Y330 459 aaPredicted RBP8.68□□□□□ -1.02
PHC3-204ENST00000472330 STAG3Q9UJ98 1225 aa8.66□□□□□ -1.02
PHC3-204ENST00000472330 SPINK5Q9NQ38 1064 aaPredicted RBP8.64□□□□□ -1.03
PHC3-204ENST00000472330 CAPN15O75808 1086 aa8.63□□□□□ -1.03
PHC3-204ENST00000472330 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
PHC3-204ENST00000472330 RGL2O15211 777 aa8.62□□□□□ -1.03
PHC3-204ENST00000472330 TSHZ2Q9NRE2 1034 aa8.62□□□□□ -1.03
PHC3-204ENST00000472330 NBR1Q14596 966 aa8.58□□□□□ -1.04
PHC3-204ENST00000472330 CHGAP10645 457 aaKnown RBP8.57□□□□□ -1.04
PHC3-204ENST00000472330 MIER1Q8N108 512 aa8.56□□□□□ -1.04
PHC3-204ENST00000472330 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
PHC3-204ENST00000472330 CIZ1Q9ULV3 898 aaPredicted RBP8.54□□□□□ -1.04
PHC3-204ENST00000472330 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
PHC3-204ENST00000472330 ZBTB47Q9UFB7 747 aaPredicted RBP8.5□□□□□ -1.05
PHC3-204ENST00000472330 ABCB7O75027 752 aa8.49□□□□□ -1.05
PHC3-204ENST00000472330 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
PHC3-204ENST00000472330 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
PHC3-204ENST00000472330 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
PHC3-204ENST00000472330 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
PHC3-204ENST00000472330 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
PHC3-204ENST00000472330 RNF39Q9H2S5 420 aa8.46□□□□□ -1.06
PHC3-204ENST00000472330 PABPN1Q86U42 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
PHC3-204ENST00000472330 HS6ST3Q8IZP7 471 aa8.44□□□□□ -1.06
PHC3-204ENST00000472330 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
PHC3-204ENST00000472330 C1QBPQ07021 282 aaKnown RBP8.43□□□□□ -1.06
PHC3-204ENST00000472330 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
PHC3-204ENST00000472330 TULP1O00294 542 aaPredicted RBP8.4□□□□□ -1.06
PHC3-204ENST00000472330 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
PHC3-204ENST00000472330 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms