Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TNFAIP3P21580 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TNFAIP3P21580 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TNFAIP3P21580 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TNFAIP3P21580 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.74■■■□□ 2.51
TNFAIP3P21580 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TNFAIP3P21580 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TNFAIP3P21580 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TNFAIP3P21580 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNFAIP3P21580 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TNFAIP3P21580 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
TNFAIP3P21580 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNFAIP3P21580 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNFAIP3P21580 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNFAIP3P21580 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TNFAIP3P21580 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
TNFAIP3P21580 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TNFAIP3P21580 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.56■■■□□ 2.48
TNFAIP3P21580 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TNFAIP3P21580 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
TNFAIP3P21580 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TNFAIP3P21580 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TNFAIP3P21580 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.42■■■□□ 2.46
TNFAIP3P21580 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.4■■■□□ 2.46
TNFAIP3P21580 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TNFAIP3P21580 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.35■■■□□ 2.45
TNFAIP3P21580 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TNFAIP3P21580 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.33■■■□□ 2.45
TNFAIP3P21580 AC006077.2-201ENST00000623591 457 ntBASIC30.3■■■□□ 2.44
TNFAIP3P21580 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TNFAIP3P21580 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
TNFAIP3P21580 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TNFAIP3P21580 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.28■■■□□ 2.44
TNFAIP3P21580 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
TNFAIP3P21580 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.44
TNFAIP3P21580 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TNFAIP3P21580 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TNFAIP3P21580 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.25■■■□□ 2.43
TNFAIP3P21580 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TNFAIP3P21580 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNFAIP3P21580 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNFAIP3P21580 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
TNFAIP3P21580 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
TNFAIP3P21580 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TNFAIP3P21580 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.19■■■□□ 2.42
TNFAIP3P21580 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TNFAIP3P21580 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TNFAIP3P21580 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TNFAIP3P21580 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.16■■■□□ 2.42
TNFAIP3P21580 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TNFAIP3P21580 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
TNFAIP3P21580 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TNFAIP3P21580 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TNFAIP3P21580 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TNFAIP3P21580 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
TNFAIP3P21580 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TNFAIP3P21580 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TNFAIP3P21580 ZNRF2P1-201ENST00000441407 443 ntBASIC30.07■■■□□ 2.4
TNFAIP3P21580 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
TNFAIP3P21580 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TNFAIP3P21580 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TNFAIP3P21580 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.05■■■□□ 2.4
TNFAIP3P21580 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.03■■■□□ 2.4
TNFAIP3P21580 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TNFAIP3P21580 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30■■■□□ 2.39
TNFAIP3P21580 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TNFAIP3P21580 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.98■■■□□ 2.39
TNFAIP3P21580 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TNFAIP3P21580 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TNFAIP3P21580 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
TNFAIP3P21580 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TNFAIP3P21580 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.93■■■□□ 2.38
TNFAIP3P21580 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.91■■■□□ 2.38
TNFAIP3P21580 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.91■■■□□ 2.38
TNFAIP3P21580 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.9■■■□□ 2.38
TNFAIP3P21580 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
TNFAIP3P21580 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.88■■■□□ 2.37
TNFAIP3P21580 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
TNFAIP3P21580 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.86■■■□□ 2.37
TNFAIP3P21580 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.86■■■□□ 2.37
TNFAIP3P21580 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
TNFAIP3P21580 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
TNFAIP3P21580 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TNFAIP3P21580 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
TNFAIP3P21580 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TNFAIP3P21580 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TNFAIP3P21580 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
TNFAIP3P21580 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TNFAIP3P21580 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TNFAIP3P21580 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TNFAIP3P21580 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TNFAIP3P21580 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
TNFAIP3P21580 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
TNFAIP3P21580 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TNFAIP3P21580 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
TNFAIP3P21580 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.76■■■□□ 2.35
TNFAIP3P21580 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
TNFAIP3P21580 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.75■■■□□ 2.35
TNFAIP3P21580 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.75■■■□□ 2.35
TNFAIP3P21580 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms