Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PPP3CBP16298 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP3CBP16298 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PPP3CBP16298 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PPP3CBP16298 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
PPP3CBP16298 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.57■■□□□ 1.68
PPP3CBP16298 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PPP3CBP16298 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.55■■□□□ 1.68
PPP3CBP16298 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP3CBP16298 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.53■■□□□ 1.68
PPP3CBP16298 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP3CBP16298 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP3CBP16298 DYNLL1-208ENST00000550178 581 ntBASIC25.49■■□□□ 1.67
PPP3CBP16298 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
PPP3CBP16298 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PPP3CBP16298 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PPP3CBP16298 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PPP3CBP16298 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP3CBP16298 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP3CBP16298 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP3CBP16298 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPP3CBP16298 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
PPP3CBP16298 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP3CBP16298 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PPP3CBP16298 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP3CBP16298 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPP3CBP16298 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PPP3CBP16298 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPP3CBP16298 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP3CBP16298 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP3CBP16298 AL031258.1-201ENST00000623562 325 ntBASIC25.31■■□□□ 1.64
PPP3CBP16298 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP3CBP16298 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PPP3CBP16298 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP3CBP16298 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP3CBP16298 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP3CBP16298 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PPP3CBP16298 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.26■■□□□ 1.63
PPP3CBP16298 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
PPP3CBP16298 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PPP3CBP16298 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PPP3CBP16298 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PPP3CBP16298 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.19■■□□□ 1.62
PPP3CBP16298 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.17■■□□□ 1.62
PPP3CBP16298 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP3CBP16298 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.13■■□□□ 1.61
PPP3CBP16298 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.13■■□□□ 1.61
PPP3CBP16298 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP3CBP16298 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.12■■□□□ 1.61
PPP3CBP16298 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.11■■□□□ 1.61
PPP3CBP16298 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.11■■□□□ 1.61
PPP3CBP16298 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP3CBP16298 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.1■■□□□ 1.61
PPP3CBP16298 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP3CBP16298 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPP3CBP16298 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP3CBP16298 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PPP3CBP16298 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPP3CBP16298 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.04■■□□□ 1.6
PPP3CBP16298 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.04■■□□□ 1.6
PPP3CBP16298 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPP3CBP16298 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25■■□□□ 1.59
PPP3CBP16298 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25■■□□□ 1.59
PPP3CBP16298 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
PPP3CBP16298 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PPP3CBP16298 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.98■■□□□ 1.59
PPP3CBP16298 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.98■■□□□ 1.59
PPP3CBP16298 AC145285.7-201ENST00000614819 1539 ntBASIC24.97■■□□□ 1.59
PPP3CBP16298 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PPP3CBP16298 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
PPP3CBP16298 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.95■■□□□ 1.58
PPP3CBP16298 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PPP3CBP16298 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.93■■□□□ 1.58
PPP3CBP16298 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP3CBP16298 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP3CBP16298 RARRES2P7-201ENST00000567349 469 ntBASIC24.9■■□□□ 1.58
PPP3CBP16298 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP3CBP16298 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.87■■□□□ 1.57
PPP3CBP16298 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP3CBP16298 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP3CBP16298 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPP3CBP16298 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP3CBP16298 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PPP3CBP16298 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.8■■□□□ 1.56
PPP3CBP16298 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PPP3CBP16298 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.79■■□□□ 1.56
PPP3CBP16298 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.78■■□□□ 1.56
PPP3CBP16298 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PPP3CBP16298 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP3CBP16298 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
PPP3CBP16298 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PPP3CBP16298 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.72■■□□□ 1.55
PPP3CBP16298 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.7■■□□□ 1.54
PPP3CBP16298 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.7■■□□□ 1.54
PPP3CBP16298 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.7■■□□□ 1.54
PPP3CBP16298 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.7■■□□□ 1.54
PPP3CBP16298 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.69■■□□□ 1.54
PPP3CBP16298 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP3CBP16298 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PPP3CBP16298 SETD8P1-201ENST00000623146 1180 ntBASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms