Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RAB40ALP0C0E4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
RAB40ALP0C0E4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RAB40ALP0C0E4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RAB40ALP0C0E4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RAB40ALP0C0E4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.44■■□□□ 1.98
RAB40ALP0C0E4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RAB40ALP0C0E4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
RAB40ALP0C0E4 AL031258.1-201ENST00000623562 325 ntBASIC27.42■■□□□ 1.98
RAB40ALP0C0E4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RAB40ALP0C0E4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
RAB40ALP0C0E4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAB40ALP0C0E4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAB40ALP0C0E4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.34■■□□□ 1.97
RAB40ALP0C0E4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.33■■□□□ 1.96
RAB40ALP0C0E4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
RAB40ALP0C0E4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAB40ALP0C0E4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RAB40ALP0C0E4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAB40ALP0C0E4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RAB40ALP0C0E4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.21■■□□□ 1.95
RAB40ALP0C0E4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.21■■□□□ 1.95
RAB40ALP0C0E4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RAB40ALP0C0E4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RAB40ALP0C0E4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAB40ALP0C0E4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RAB40ALP0C0E4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.14■■□□□ 1.94
RAB40ALP0C0E4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.13■■□□□ 1.93
RAB40ALP0C0E4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
RAB40ALP0C0E4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.11■■□□□ 1.93
RAB40ALP0C0E4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.1■■□□□ 1.93
RAB40ALP0C0E4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.09■■□□□ 1.93
RAB40ALP0C0E4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.08■■□□□ 1.93
RAB40ALP0C0E4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RAB40ALP0C0E4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
RAB40ALP0C0E4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAB40ALP0C0E4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAB40ALP0C0E4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RAB40ALP0C0E4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.98■■□□□ 1.91
RAB40ALP0C0E4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RAB40ALP0C0E4 RARRES2P7-201ENST00000567349 469 ntBASIC26.94■■□□□ 1.9
RAB40ALP0C0E4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RAB40ALP0C0E4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.91■■□□□ 1.9
RAB40ALP0C0E4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RAB40ALP0C0E4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.9■■□□□ 1.9
RAB40ALP0C0E4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAB40ALP0C0E4 AC145285.7-201ENST00000614819 1539 ntBASIC26.85■■□□□ 1.89
RAB40ALP0C0E4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAB40ALP0C0E4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.83■■□□□ 1.89
RAB40ALP0C0E4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
RAB40ALP0C0E4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
RAB40ALP0C0E4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.81■■□□□ 1.88
RAB40ALP0C0E4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.8■■□□□ 1.88
RAB40ALP0C0E4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.8■■□□□ 1.88
RAB40ALP0C0E4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.78■■□□□ 1.88
RAB40ALP0C0E4 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.78■■□□□ 1.88
RAB40ALP0C0E4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.78■■□□□ 1.88
RAB40ALP0C0E4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.78■■□□□ 1.88
RAB40ALP0C0E4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
RAB40ALP0C0E4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.73■■□□□ 1.87
RAB40ALP0C0E4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAB40ALP0C0E4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RAB40ALP0C0E4 SETD8P1-201ENST00000623146 1180 ntBASIC26.71■■□□□ 1.87
RAB40ALP0C0E4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.7■■□□□ 1.86
RAB40ALP0C0E4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.7■■□□□ 1.86
RAB40ALP0C0E4 AC097358.2-201ENST00000607541 1159 ntBASIC26.69■■□□□ 1.86
RAB40ALP0C0E4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RAB40ALP0C0E4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.66■■□□□ 1.86
RAB40ALP0C0E4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.64■■□□□ 1.85
RAB40ALP0C0E4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
RAB40ALP0C0E4 AC136428.2-201ENST00000563187 214 ntBASIC26.62■■□□□ 1.85
RAB40ALP0C0E4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAB40ALP0C0E4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAB40ALP0C0E4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAB40ALP0C0E4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAB40ALP0C0E4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RAB40ALP0C0E4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.56■■□□□ 1.84
RAB40ALP0C0E4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAB40ALP0C0E4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RAB40ALP0C0E4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RAB40ALP0C0E4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.54■■□□□ 1.84
RAB40ALP0C0E4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAB40ALP0C0E4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAB40ALP0C0E4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.48■■□□□ 1.83
RAB40ALP0C0E4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.48■■□□□ 1.83
RAB40ALP0C0E4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAB40ALP0C0E4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAB40ALP0C0E4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.46■■□□□ 1.83
RAB40ALP0C0E4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.45■■□□□ 1.82
RAB40ALP0C0E4 SUZ12P1-203ENST00000578195 985 ntBASIC26.45■■□□□ 1.82
RAB40ALP0C0E4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RAB40ALP0C0E4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RAB40ALP0C0E4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAB40ALP0C0E4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAB40ALP0C0E4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RAB40ALP0C0E4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.38■■□□□ 1.81
RAB40ALP0C0E4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB40ALP0C0E4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB40ALP0C0E4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB40ALP0C0E4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms