Protein–RNA interactions for Protein: O75074

LRP3, Low-density lipoprotein receptor-related protein 3, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3O75074 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.5■■■□□ 2.31
LRP3O75074 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LRP3O75074 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.44■■■□□ 2.3
LRP3O75074 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
LRP3O75074 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LRP3O75074 RARRES2P7-201ENST00000567349 469 ntBASIC29.41■■■□□ 2.3
LRP3O75074 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LRP3O75074 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.38■■■□□ 2.29
LRP3O75074 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LRP3O75074 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LRP3O75074 AC097358.2-201ENST00000607541 1159 ntBASIC29.21■■■□□ 2.27
LRP3O75074 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
LRP3O75074 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.2■■■□□ 2.27
LRP3O75074 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.14■■■□□ 2.26
LRP3O75074 RPS2P35-201ENST00000443417 897 ntBASIC29.12■■■□□ 2.25
LRP3O75074 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
LRP3O75074 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.09■■■□□ 2.25
LRP3O75074 AC136428.2-201ENST00000563187 214 ntBASIC29.07■■■□□ 2.24
LRP3O75074 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LRP3O75074 SUZ12P1-203ENST00000578195 985 ntBASIC29.03■■■□□ 2.24
LRP3O75074 SETD8P1-201ENST00000623146 1180 ntBASIC29.03■■■□□ 2.24
LRP3O75074 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
LRP3O75074 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
LRP3O75074 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
LRP3O75074 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.98■■■□□ 2.23
LRP3O75074 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
LRP3O75074 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LRP3O75074 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
LRP3O75074 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.93■■■□□ 2.22
LRP3O75074 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
LRP3O75074 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
LRP3O75074 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.88■■■□□ 2.21
LRP3O75074 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.87■■■□□ 2.21
LRP3O75074 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
LRP3O75074 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LRP3O75074 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.82■■■□□ 2.2
LRP3O75074 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
LRP3O75074 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.8■■■□□ 2.2
LRP3O75074 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LRP3O75074 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
LRP3O75074 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.78■■■□□ 2.2
LRP3O75074 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
LRP3O75074 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.77■■■□□ 2.2
LRP3O75074 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.76■■■□□ 2.2
LRP3O75074 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LRP3O75074 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
LRP3O75074 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.69■■■□□ 2.18
LRP3O75074 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.69■■■□□ 2.18
LRP3O75074 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LRP3O75074 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
LRP3O75074 AP006261.1-201ENST00000584783 668 ntBASIC28.61■■■□□ 2.17
LRP3O75074 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
LRP3O75074 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
LRP3O75074 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.6■■■□□ 2.17
LRP3O75074 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.59■■■□□ 2.17
LRP3O75074 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
LRP3O75074 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.59■■■□□ 2.17
LRP3O75074 AL162393.1-201ENST00000437852 946 ntBASIC28.58■■■□□ 2.17
LRP3O75074 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LRP3O75074 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
LRP3O75074 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.54■■■□□ 2.16
LRP3O75074 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
LRP3O75074 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.52■■■□□ 2.16
LRP3O75074 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
LRP3O75074 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
LRP3O75074 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.48■■■□□ 2.15
LRP3O75074 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LRP3O75074 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.45■■■□□ 2.14
LRP3O75074 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.45■■■□□ 2.14
LRP3O75074 CAHM-201ENST00000604200 896 ntBASIC28.43■■■□□ 2.14
LRP3O75074 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LRP3O75074 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LRP3O75074 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LRP3O75074 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LRP3O75074 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LRP3O75074 MIR7108-201ENST00000614319 87 ntBASIC28.34■■■□□ 2.13
LRP3O75074 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
LRP3O75074 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
LRP3O75074 AL391121.1-201ENST00000607967 1349 ntBASIC28.3■■■□□ 2.12
LRP3O75074 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LRP3O75074 ABHD17AP4-201ENST00000411545 909 ntBASIC28.3■■■□□ 2.12
LRP3O75074 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LRP3O75074 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.29■■■□□ 2.12
LRP3O75074 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LRP3O75074 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
LRP3O75074 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.28■■■□□ 2.12
LRP3O75074 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.28■■■□□ 2.12
LRP3O75074 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
LRP3O75074 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.27■■■□□ 2.12
LRP3O75074 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LRP3O75074 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.23■■■□□ 2.11
LRP3O75074 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
LRP3O75074 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.21■■■□□ 2.11
LRP3O75074 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
LRP3O75074 MIR3665-201ENST00000578708 105 ntBASIC28.21■■■□□ 2.11
LRP3O75074 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LRP3O75074 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.19■■■□□ 2.1
LRP3O75074 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.18■■■□□ 2.1
LRP3O75074 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LRP3O75074 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms